title: Determination of the in vivo NAD:NADH ratio in Saccharomyces cerevisiae under anaerobic conditions, using alcohol dehydrogenase as sensor reaction.
abstract: With the current quantitative metabolomics techniques, only whole-cell concentrations of NAD and NADH can be quantified. These measurements cannot provide information on the in vivo redox state of the cells, which is determined by the ratio of the free forms only. In this work we quantified free NAD:NADH ratios in yeast under anaerobic conditions, using alcohol dehydrogenase (ADH) and the lumped reaction of glyceraldehyde-3-phosphate dehydrogenase and 3-phosphoglycerate kinase as sensor reactions. We showed that, with an alternative accurate acetaldehyde determination method, based on rapid sampling, instantaneous derivatization with 2,4 diaminophenol hydrazine (DNPH) and quantification with HPLC, the ADH-catalysed oxidation of ethanol to acetaldehyde can be applied as a relatively fast and simple sensor reaction to quantify the free NAD:NADH ratio under anaerobic conditions. We evaluated the applicability of ADH as a sensor reaction in the yeast Saccharomyces cerevisiae, grown in anaerobic glucose-limited chemostats under steady-state and dynamic conditions. The results found in this study showed that the cytosolic redox status (NAD:NADH ratio) of yeast is at least one order of magnitude lower, and is thus much more reduced, under anaerobic conditions compared to aerobic glucose-limited steady-state conditions. The more reduced state of the cytosol under anaerobic conditions has major implications for (central) metabolism. Accurate determination of the free NAD:NADH ratio is therefore of importance for the unravelling of in vivo enzyme kinetics and to judge accurately the thermodynamic reversibility of each redox reaction.
authors.affiliation: Kluyver Centre for Genomics of Industrial Fermentation, Delft, The Netherlands.|Department of Biotechnology, Delft University of Technology, Delft, The Netherlands.
authors.forename: K M
authors.initials: KM
authors.lastname: Bekers
authors.affiliation: Kluyver Centre for Genomics of Industrial Fermentation, Delft, The Netherlands.|Department of Biotechnology, Delft University of Technology, Delft, The Netherlands.
authors.forename: J J
authors.initials: JJ
authors.lastname: Heijnen
authors.affiliation: Kluyver Centre for Genomics of Industrial Fermentation, Delft, The Netherlands.|Department of Biotechnology, Delft University of Technology, Delft, The Netherlands.
authors.forename: W M
authors.initials: WM
authors.lastname: van Gulik
mesh_terms: D000426:Alcohol Dehydrogenase / Q000737:chemistry / Q000378:metabolism*; D000693:Anaerobiosis; D000431:Ethanol / Q000378:metabolism; D005947:Glucose / Q000378:metabolism; D009243:NAD / Q000032:analysis / Q000378:metabolism*; D010084:Oxidation-Reduction; D012441:Saccharomyces cerevisiae / Q000737:chemistry / Q000201:enzymology / Q000378:metabolism*; D029701:Saccharomyces cerevisiae Proteins / Q000737:chemistry / Q000378:metabolism*
chemical_list: D029701:Saccharomyces cerevisiae Proteins; D009243:NAD; D000431:Ethanol; D000426:Alcohol Dehydrogenase; D005947:Glucose
keywords: Saccharomyces cerevisiae; acetaldehyde; alcohol dehydrogenase; anaerobiosis; free NAD:NADH ratio