title: Molecular Simulation of the DPPE Lipid Bilayer Gel Phase: Coupling between Molecular Packing Order and Tail Tilt Angle.
abstract: The structural properties and thermal stability of dipalmitoylphosphatidylethanolamine (DPPE) in the ordered gel phase have been studied by molecular dynamics simulation using two force fields: the Berger united-atom model and the CHARMM C36 atomistic model. As is widely known, structural features are sensitive to the initial preparation of the gel phase structure, as some degrees of freedom are slow to equilibrate on the simulation time scale of hundreds of nanoseconds. In particular, we find that the degree of alignment of the lipids' glycerol backbones, which join the two hydrocarbon tails of each molecule, strongly affects the tilt angle of the tails in the resulting structures. Disorder in the backbone correlates with lower tilt angles: bilayer configurations initiated with aligned backbones produced tilt angles near 21° and 29° for the Berger and C36 force fields, respectively, while structures initiated with randomized backbone orientations showed average tilt angles of 7° and 18°, in closer agreement with the untilted structure observed experimentally. The transition temperature for the Berger force field gel bilayer has been determined by monitoring changes in width of gel phase stripe domains as a function of temperature and is 12 ± 5 K lower than the experimental value.
authors.affiliation: Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States.
authors.forename: Karthik
authors.initials: K
authors.lastname: Uppulury
authors.affiliation: Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States.
authors.forename: Patrick S
authors.initials: PS
authors.lastname: Coppock
authors.affiliation: Department of Chemistry, Emory University, Atlanta, Georgia 30322, United States.
authors.forename: James T
authors.initials: JT
authors.lastname: Kindt
mesh_terms: D005782:Gels; D008051:Lipid Bilayers; D008956:Models, Chemical; D010714:Phosphatidylethanolamines / Q000737:chemistry*
chemical_list: D005782:Gels; D008051:Lipid Bilayers; D010714:Phosphatidylethanolamines; C007510:1,2-dipalmitoyl-3-phosphatidylethanolamine