title: Algorithm for systematic peak extraction from atomic pair distribution functions.
abstract: The study presents an algorithm, ParSCAPE, for model-independent extraction of peak positions and intensities from atomic pair distribution functions (PDFs). It provides a statistically motivated method for determining parsimony of extracted peak models using the information-theoretic Akaike information criterion (AIC) applied to plausible models generated within an iterative framework of clustering and chi-square fitting. All parameters the algorithm uses are in principle known or estimable from experiment, though careful judgment must be applied when estimating the PDF baseline of nanostructured materials. ParSCAPE has been implemented in the Python program SrMise. Algorithm performance is examined on synchrotron X-ray PDFs of 16 bulk crystals and two nanoparticles using AIC-based multimodeling techniques, and particularly the impact of experimental uncertainties on extracted models. It is quite resistant to misidentification of spurious peaks coming from noise and termination effects, even in the absence of a constraining structural model. Structure solution from automatically extracted peaks using the Liga algorithm is demonstrated for 14 crystals and for C60. Special attention is given to the information content of the PDF, theory and practice of the AIC, as well as the algorithm's limitations.
authors.affiliation: Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, 48824, USA.
authors.forename: L
authors.initials: L
authors.lastname: Granlund
authors.affiliation: Department of Applied Physics and Applied Mathematics, Columbia University, New York, NY 10027, USA.
authors.forename: S J L
authors.initials: SJ
authors.lastname: Billinge
authors.affiliation: Department of Physics and Astronomy, Michigan State University, East Lansing, Michigan, 48824, USA.
authors.forename: P M
authors.initials: PM
authors.lastname: Duxbury
keywords: Akaike information criterion; computer program; model selection; pair distribution function; peak extraction