title: Analysis of genome comparison of two Indian isolates of Cowpea aphid-borne mosaic virus from India.
abstract: The complete sequence of two Cowpea aphid-borne mosaic virus (CABMV) isolates (RR3 and RR4) from India was determined. Phylogenetic analysis showed that both isolates showed different closeness with other isolates of CABMV. CABMV-RR3 showed maximum identity of 99 % with CABMV-BR1 from Brazil at nucleotide and protein levels, whereas CABMV-RR4 showed identity of 73 and 95 % with CABMV-Z isolate from Zimbabwe at nucleotide and protein levels respectively. Similarity identity matrix revealed 69 % identity at nucleotide level and 91 % at protein level with each other. Recombination breakpoint detection showed that CABMV-MG-Avr from Brazil and CABMV-Z from Zimbabwe act as major parents in our isolates RR3 and RR4, respectively.
authors.affiliation: Department of Science, College of Arts, Science and Humanities, Mody University of Science and Technology, Lakshmangarh, Sikar, 332311, Rajasthan, India.
authors.forename: Ritesh
authors.initials: R
authors.lastname: Mishra
authors.affiliation: Department of Science, College of Arts, Science and Humanities, Mody University of Science and Technology, Lakshmangarh, Sikar, 332311, Rajasthan, India.
authors.forename: Rakesh Kumar
authors.initials: RK
authors.lastname: Verma
authors.affiliation: Department of Science, College of Arts, Science and Humanities, Mody University of Science and Technology, Lakshmangarh, Sikar, 332311, Rajasthan, India. gaurrajarshi@hotmail.com.
authors.forename: Rajarshi Kumar
authors.initials: RK
authors.lastname: Gaur
mesh_terms: D000818:Animals; D001042:Aphids / Q000821:virology*; D016000:Cluster Analysis; D016679:Genome, Viral; D007194:India; D008969:Molecular Sequence Data; D009029:Mosaic Viruses / Q000145:classification* / Q000235:genetics* / Q000302:isolation & purification; D010802:Phylogeny; D012367:RNA, Viral / Q000235:genetics*; D017422:Sequence Analysis, DNA; D017385:Sequence Homology
chemical_list: D012367:RNA, Viral
keywords: Complete sequence; Cowpea aphid-borne mosaic virus; Polyprotein; Potyvirus; Recombination