title: Ribosomal Synthesis of Natural-Product-Like Bicyclic Peptides in Escherichia coli.
abstract: Methods to access natural-product-like macrocyclic peptides can disclose new opportunities for the exploration of this important structural class for chemical biology and drug discovery applications. Here, the scope and mechanism of a novel strategy for directing the biosynthesis of thioether-bridged bicyclic peptides in bacterial cells was investigated. This method entails split intein-catalyzed head-to-tail cyclization of a ribosomally produced precursor peptide, combined with inter-side-chain crosslinking through a genetically encoded cysteine-reactive amino acid. This strategy could be successfully applied to achieve formation of structurally diverse bicyclic peptides with high efficiency and selectivity in Escherichia coli. Insights into the sequence of reactions underlying the peptide bicyclization process were gained from time-course experiments. Finally, the potential utility of this methodology toward the discovery of macrocyclic peptides with enhanced functional properties was demonstrated through the isolation of a bicyclic peptide with sub-micromolar affinity for streptavidin.
authors.affiliation: Department of Chemistry, University of Rochester, RC Box 270216, Rochester, NY, 14627, USA.
authors.forename: Nina
authors.initials: N
authors.lastname: Bionda
authors.affiliation: Department of Chemistry, University of Rochester, RC Box 270216, Rochester, NY, 14627, USA. fasan@chem.rochester.edu.
authors.forename: Rudi
authors.initials: R
authors.lastname: Fasan
mesh_terms: D000595:Amino Acid Sequence; D001688:Biological Products / Q000737:chemistry / Q000378:metabolism; D004926:Escherichia coli / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D005818:Genetic Engineering; D047668:Inteins; D008969:Molecular Sequence Data; D010456:Peptides, Cyclic / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D014176:Protein Biosynthesis; D013440:Sulfides / Q000737:chemistry / Q000378:metabolism*
chemical_list: D001688:Biological Products; D010456:Peptides, Cyclic; D013440:Sulfides
keywords: bicyclic peptides; ribosomal synthesis; split inteins; thioether bridges; unnatural amino acids