title: Continuous fluorometric method for measuring β-glucuronidase activity: comparative analysis of three fluorogenic substrates.
abstract: E. coli β-glucuronidase (GUS) activity assays are routinely used in fields such as plant molecular biology, applied microbiology and healthcare. Methods based on the optical detection of GUS using synthetic fluorogenic substrates are widely employed since they don't require expensive instrumentation and are easy to perform. In this study three fluorogenic substrates and their respective fluorophores were studied for the purpose of developing a continuous fluorometric method for GUS. The fluorescence intensity of 6-chloro-4-methyl-umbelliferone (6-CMU) at pH 6.8 was found to be 9.5 times higher than that of 4-methyl umbelliferone (4-MU) and 3.2 times higher than the fluorescence of 7-hydroxycoumarin-3-carboxylic acid (3-CU). Michaelis-Menten kinetic parameters of GUS catalysed hydrolysis of 6-chloro-4-methyl-umbelliferyl-β-D-glucuronide (6-CMUG) were determined experimentally (Km = 0.11 mM, Kcat = 74 s(-1), Kcat/Km = 6.93 × 10(5) s(-1) M(-1)) and compared with the ones found for 4-methyl-umbelliferyl-β-D-glucuronide (4-MUG) (Km = 0.07 mM, Kcat = 92 s(-1), Kcat/Km = 1.29 × 10(6) s(-1) M(-1)) and 3-carboxy-umbelliferyl-β-D-glucuronide (3-CUG) (Km = 0.48 mM, Kcat = 35 s(-1), Kcat/Km = 7.40 × 10(4) s(-1) M(-1)). Finally a continuous fluorometric method based on 6-CMUG as a fluorogenic substrate has been developed for measuring GUS activity. When compared with the highly used discontinuous method based on 4-MUG as a substrate it was found that the new method is more sensitive and reproducible (%RSD = 4.88). Furthermore, the developed method is less laborious, faster and more economical and should provide an improved alternative for GUS assays and kinetic studies.
authors.affiliation: Marine and Environmental Sensing Technology Hub (MESTECH), National Centre for Sensor Research (NCSR), School of Chemical Sciences, Dublin City University, Dublin, Ireland. fiona.regan@dcu.ie.
authors.forename: Ciprian
authors.initials: C
authors.lastname: Briciu-Burghina
authors.forename: Brendan
authors.initials: B
authors.lastname: Heery
authors.forename: Fiona
authors.initials: F
authors.lastname: Regan
mesh_terms: D004926:Escherichia coli / Q000201:enzymology; D005456:Fluorescent Dyes / Q000737:chemistry / Q000378:metabolism*; D005470:Fluorometry; D005966:Glucuronidase / Q000737:chemistry / Q000378:metabolism*; D006863:Hydrogen-Ion Concentration; D007700:Kinetics; D013379:Substrate Specificity; D013696:Temperature; D014468:Umbelliferones / Q000737:chemistry / Q000378:metabolism
chemical_list: C106879:7-hydroxycoumarin-3-carboxylic acid; D005456:Fluorescent Dyes; D014468:Umbelliferones; C031477:7-hydroxycoumarin; D005966:Glucuronidase