title: Creating σ-holes through the formation of beryllium bonds.
abstract: Through the use of ab initio theoretical models based on MP2/aug-cc-pVDZ-optimized geometries and CCSD(T)/aug-cc-pVTZ and CCSD(T)/aug-c-pVDZ total energies, it has been shown that the significant electron density rearrangements that follow the formation of a beryllium bond may lead to the appearance of a σ-hole in systems that previously do not exhibit this feature, such as CH3 OF, NO2 F, NO3 F, and other fluorine-containing systems. The creation of the σ-hole is another manifestation of the bond activation-reinforcement (BAR) rule. The appearance of a σ-hole on the F atoms of CH3 OF is due to the enhancement of the electronegativity of the O atom that participates in the beryllium bond. This atom recovers part of the charge transferred to Be by polarizing the valence density of the F into the bonding region. An analysis of the electron density shows that indeed this bond becomes reinforced, but the F atom becomes more electron deficient with the appearance of the σ-hole. Importantly, similar effects are also observed even when the atom participating in the beryllium bond is not directly attached to the F atom, as in NO2 F, NO3 F, or NCF. Hence, whereas the isolated CH3 OF, NO2 F, and NO3 F are unable to yield F⋅⋅⋅Base halogen bonds, their complexes with BeX2 derivatives are able to yield such bonds. Significant cooperative effects between the new halogen bond and the beryllium bond reinforce the strength of both noncovalent interactions.
authors.affiliation: Departamento de Química, Módulo 13, Universidad Autónoma de Madrid, Campus de Excelencia UAM-CSIC, Cantoblanco, 28049 Madrid (Spain), Fax: (+34) 91-497-5238.
authors.forename: Oriana
authors.initials: O
authors.lastname: Brea
authors.affiliation: Departamento de Química, Módulo 13, Universidad Autónoma de Madrid, Campus de Excelencia UAM-CSIC, Cantoblanco, 28049 Madrid (Spain), Fax: (+34) 91-497-5238.
authors.forename: Otilia
authors.initials: O
authors.lastname: Mó
authors.affiliation: Departamento de Química, Módulo 13, Universidad Autónoma de Madrid, Campus de Excelencia UAM-CSIC, Cantoblanco, 28049 Madrid (Spain), Fax: (+34) 91-497-5238. manuel.yanez@uam.es.
authors.forename: Manuel
authors.initials: M
authors.lastname: Yáñez
authors.affiliation: Instituto de Química Médica (IQM-CSIC), Juan de la Cierva, 3, 28006 Madrid (Spain). ibon@iqm.csic.es.
authors.forename: Ibon
authors.initials: I
authors.lastname: Alkorta
authors.affiliation: Instituto de Química Médica (IQM-CSIC), Juan de la Cierva, 3, 28006 Madrid (Spain).
authors.forename: José
authors.initials: J
authors.lastname: Elguero
keywords: beryllium; cooperative effects; halogen bonds; molecular modeling; noncovalent interactions