title: Protein Extraction by Means of Electroporation from E. coli with Preserved Viability.
abstract: Extracting proteins by means of electroporation from different microorganisms is gaining on its importance, as electroporation is a quick, chemical-free, and cost-effective method. Since complete cell destruction (to obtain proteins) necessitates additional work, and cost of purifying the end-product is high, pulses have to be adjusted in order to prevent total disintegration. Namely, total disintegration of the cell releases bacterial membrane contaminants in the final sample. Therefore, our goal was to study different electric pulse parameters in order to extract as much proteins as possible from E. coli bacteria, while preserving bacterial viability. Our results show that by increasing electric field strength the concentration of extracted proteins increases and viability reduces. The correlation is reasonable, since high electric field destroys bacterial envelope, releasing all intracellular components into surrounding media. The strong correlation was also found with pulse duration. However, at longer pulses we obtained more proteins, while bacterial viability was not as much affected. Pulse number and/or pulse repetition frequency at our conditions have no or little effect on concentration of extracted proteins and/or bacterial viability. We can conclude that the most promising pulse protocol for protein extraction by means of electroporation based on our experience would be longer pulses with lower pulse amplitude assuring high protein yield and low effect on bacterial viability.
authors.affiliation: Laboratory of Biocybernetics, Faculty of Electrical Engineering, University of Ljubljana, Trzaska 25, 1000, Ljubljana, Slovenia.
authors.forename: Sasa
authors.initials: S
authors.lastname: Haberl Meglic
authors.forename: Tilen
authors.initials: T
authors.lastname: Marolt
authors.forename: Damijan
authors.initials: D
authors.lastname: Miklavcic
mesh_terms: D002462:Cell Membrane / Q000378:metabolism*; D002470:Cell Survival; D018274:Electroporation / Q000379:methods*; D004926:Escherichia coli / Q000737:chemistry / Q000254:growth & development* / Q000378:metabolism; D029968:Escherichia coli Proteins / Q000302:isolation & purification*; D050296:Microbial Viability
chemical_list: D029968:Escherichia coli Proteins