title: Current methods for the identification of carbapenemases.
abstract: Detection of carbapenemases in clinical microbiology labs is a challenging issue. Comparison of the results of susceptibility testing with the breakpoint values of carbapenems is the first step in the screening of carbapenemase producers. To date, screening of carbapenemase-producing (CP) bacteria has been mostly performed by a selective medium. Although these media are practical for the detection of most CP isolates, the inoculated plates have to be incubated overnight. Subsequently, we need the confirmation of the carbapenemase producers present in the culture medium by additional testing [e.g. inhibition studies with liquid or solid media, modified Hodge test (MHT), or gradient strips], which can take up to another 48 hours. Despite the lack of discrimination between the three different classes of carbapenemases (KPC, MBL and OXA) and difficulties in the interpretation of the results, the MHT is usually deemed as the phenotypic reference method for the confirmation of carbapenemase production. Molecular techniques, such as real-time polymerase chain reaction (PCR) assays, in contrast to phenotypic methods that are very time consuming, are faster and allow for the quick identification of carbapenemase genes. These techniques can detect and characterize carbapenemases, including NDM- and KPC-mediated resistance, which is critical for epidemiological investigations. The aim of this review is to gather a summary of the available methods for carbapenemase detection and describe the strengths and weaknesses of each method.
authors.affiliation: a Drug Applied Research Center, Faculty of Medical Sciences , Tabriz University of Medical Sciences , Iran.
authors.forename: Abed Zahedi
authors.initials: AZ
authors.lastname: Bialvaei
authors.affiliation: a Drug Applied Research Center, Faculty of Medical Sciences , Tabriz University of Medical Sciences , Iran.
authors.forename: Hossein Samadi
authors.initials: HS
authors.lastname: Kafil
authors.affiliation: b Biotechnology Research Center , Tabriz University of Medical Sciences , Iran.
authors.forename: Mohammad
authors.initials: M
authors.lastname: Asgharzadeh
authors.affiliation: c Infectious Disease and Tropical Medicine Research Center , Tabriz University of Medical Sciences , Iran.
authors.forename: Mohammad
authors.initials: M
authors.lastname: Yousef Memar
authors.affiliation: d Immunology Research Center , Tabriz University of Medical Sciences , Iran.
authors.forename: Mehdi
authors.initials: M
authors.lastname: Yousefi
mesh_terms: D001426:Bacterial Proteins / Q000032:analysis*; D001431:Bacteriological Techniques / Q000379:methods*; D004755:Enterobacteriaceae / Q000201:enzymology* / Q000302:isolation & purification; D057075:Enzyme Assays / Q000379:methods*; D006801:Humans; D008826:Microbial Sensitivity Tests / Q000379:methods*; D001618:beta-Lactamases / Q000032:analysis*
chemical_list: D001426:Bacterial Proteins; D001618:beta-Lactamases; C063912:carbapenemase
keywords: Carbapenemases; Gram-negative; Identification method; Molecular methods; Phenotypic methods