title: Determination of the cis-trans isomerization barriers of L-alanyl-L-proline in aqueous solutions and at water/hydrophobic interfaces by on-line temperature-jump relaxation HPLC and dynamic on-column reaction HPLC.
abstract: Proline cis-trans isomerization is known to play a key role in the rate-determining steps of protein folding. It is thus very important to understand the influence of environments, not only bulk solutions but also microenvironments such as interfaces, on the isomerization reaction of proline peptides. Here we present two HPLC methods for measurements of kinetic and equilibrium parameters for the isomerization reactions in bulk solutions and at liquid/solid interfaces. On-line temperature-jump relaxation HPLC (T-jump HPLC) allows the determination of forward and reverse rate constants of the isomerization in a bulk solution by monitoring the whole time course of conversion of pure isomers from both sides of the reaction, in contrast to other HPLC and capillary zone electrophoresis as well as spectrometric and calorimetric methods, which use a mixture of the isomers. We can then determine cis-trans isomerization barriers of the peptide at liquid/solid interfaces from the kinetic data obtained by dynamic on-column reaction HPLC and T-jump HPLC. We observed that the interconversion around the peptide bond for l-alanyl-l-proline (Ala-Pro) in water is accelerated at the surfaces of an alkyl-bonded silica and a poly(styrene-divinylbenzene) copolymer resin, and this is caused by a remarkable decrease in the enthalpy of activation. The molecular structures of the cis and trans forms of Ala-Pro estimated by quantum mechanics calculation reveal that an equilibrium shift toward the cis form as well as the rapid isomerization of Ala-Pro at the water/hydrophobic interfaces can be attributed to the lower polarity of the interfacial water at the surfaces of the hydrophobic materials compared to that of bulk water.
authors: Graduate School of Science and Technology, Saitama University , 255 Shimo-Okubo, Sakura-ku, Saitama 338-8570, Japan.
authors: Masami
authors: M
authors: Shibukawa
authors: Graduate School of Science and Technology, Saitama University , 255 Shimo-Okubo, Sakura-ku, Saitama 338-8570, Japan.
authors: Ayaka
authors: A
authors: Miyake
authors: Graduate School of Science and Technology, Saitama University , 255 Shimo-Okubo, Sakura-ku, Saitama 338-8570, Japan.
authors: Sayaka
authors: S
authors: Eda
authors: Graduate School of Science and Technology, Saitama University , 255 Shimo-Okubo, Sakura-ku, Saitama 338-8570, Japan.
authors: Shingo
authors: S
authors: Saito
mesh_terms: D002851:Chromatography, High Pressure Liquid / Q000379:methods*; D004151:Dipeptides / Q000737:chemistry*; D057927:Hydrophobic and Hydrophilic Interactions; D007700:Kinetics; D008958:Models, Molecular; D008968:Molecular Conformation; D011137:Polystyrenes / Q000737:chemistry; D012822:Silicon Dioxide / Q000737:chemistry; D012996:Solutions; D013237:Stereoisomerism; D013696:Temperature; D014867:Water / Q000737:chemistry*
chemical_list: D004151:Dipeptides; D011137:Polystyrenes; D012996:Solutions; D014867:Water; C038123:alanylproline; D012822:Silicon Dioxide; C003771:Amberlite XAD-2 resin