Genetic diversity of Fusarium graminearum sensu lato isolates from wheat associated with Fusarium Head Blight in diverse geographic locations of Argentina.
Fusarium Head Blight is an important wheat disease in the Argentine Pampas region, being Fusarium graminearum the predominant pathogen. DNA polymorphism of the isolates was analyzed by IGS-RFLP and ISSR. IGS-RFLP and ISSR profiling were carried out using six endonucleases and eight primers, respectively. IGS-RFLP yielded 41 bands, 30 of which were polymorphic while ISSR produced 87 bands with 47 polymorphic bands. Both markers showed genetic variability among the analyzed isolates; however, IGS-RFLP was more efficient than ISSR, showing a higher polymorphic average (59.91%) than the latter (44.11%). The averages of polymorphic information content (PIC) were 0.211 and 0.129, respectively. Twenty haplotypes were identified by IGS-RFLP and 15 haplotypes by ISSR. Genotype clustering within dendrograms was different for both types of markers. The genetic groups obtained by IGS-RFLP showed a partial association to geographic origin. This is the first report on genetic variability of F. graminearum isolates from wheat in Argentina using IGS-RFLP and ISSR markers.
INBIOTEC-Instituto de Investigaciones en Biodiversidad y Biotecnología (CONICET), Mar del Plata, Argentina.
Verónica F
VF
Consolo
Centro de Investigación y Desarrollo en Fermentaciones Industriales (CINDEFI), CCT-La Plata, CONICET, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, La Plata, Argentina.
Leonel M
LM
Ortega
INBIOTEC-Instituto de Investigaciones en Biodiversidad y Biotecnología (CONICET), Mar del Plata, Argentina.
Graciela
G
Salerno
Centro de Investigación y Desarrollo en Fermentaciones Industriales (CINDEFI), CCT-La Plata, CONICET, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, La Plata, Argentina.
Andrea L
AL
Astoreca
Centro de Investigación y Desarrollo en Fermentaciones Industriales (CINDEFI), CCT-La Plata, CONICET, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, La Plata, Argentina. Electronic address: alconada@biotec.quimica.unlp.edu.ar.
Teresa M
TM
Alconada
D001118:Argentina; D004271:DNA, Fungal / Q000235:genetics / Q000302:isolation & purification; D021901:DNA, Intergenic; D005670:Fusarium / Q000235:genetics* / Q000302:isolation & purification; D005800:Genes, Fungal; D005819:Genetic Markers; D014644:Genetic Variation; D005838:Genotype; D006239:Haplotypes / Q000235:genetics; D018895:Microsatellite Repeats; D010935:Plant Diseases / Q000382:microbiology*; D012150:Polymorphism, Restriction Fragment Length; D014908:Triticum / Q000382:microbiology*
D004271:DNA, Fungal; D021901:DNA, Intergenic; D005819:Genetic Markers
Espacio intergénico-fragmentos de restricción de longitud polimórfica; Fusariosis de la Espiga de Trigo; Fusarium Head Blight; Fusarium graminearum; Inter Secuencias Simples Repetidas; Inter-simple sequence repeat; Intergenic Spacer-Restriction Fragment Length Polymorphism; Trigo; Wheat