Characterization of microsatellite markers and their correlations with growth traits in Mandarin fish (Siniperca chuatsi).
Mandarin fish (Siniperca chuatsi) is a traditionally cultured freshwater fish with high commercial value in China. To facilitate marker-assisted selection for genetic improvement of this species, 100 microsatellite markers identified in previous studies were characterized in the 25 largest and 25 smallest individuals. Twenty polymorphic loci were used to genotype 200 individuals, and the associations between their genotypes and growth traits were examined. We found that 9 genotypes at 8 loci (SC-10, Sin 135, Sin 166, AP 34-23, AP 38-11, AP 37-22, AP 37-08, and AP 37-37) were positively correlated with growth traits (body weight, body length, body height) in the mandarin fish population. The average of observed and expected heterozygosities were 0.71 and 0.59, respectively, and the average polymorphism information content value was 0.54, indicating that the population had high genetic diversity. The markers developed in this study are useful for selection of genetic breeding in this species and its related species.
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Yi
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Fang
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China xufang_liang@hotmail.com.
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Liang
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Sun
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Li
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Luo
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Guo
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Dou
College of Fisheries, Key Lab of Freshwater Animal Breeding, Ministry of Agriculture, Huazhong Agricultural University, Freshwater Aquaculture Collaborative Innovation Center of Hubei Province, Wuhan, Hubei, China.
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Sun
D000818:Animals; D002681:China; D056726:Genetic Association Studies; D014644:Genetic Variation; D005828:Genetics, Population; D006579:Heterozygote; D018895:Microsatellite Repeats; D010473:Perciformes / Q000235:genetics*; D000068618:Selective Breeding