title: The mitochondrial genome of Schizothorax esocinus (Cypriniformes: Cyprinidae) from Northern Pakistan.
abstract: The mitochondrial DNA sequence represents a mainstay of phylogenetics. It allows biologists to elucidate the evolutionary relationships among species. It also permits an examination of the relatedness of populations, hence got importance in the field of biology. The current study was designed to know the mitochondrial sequence of Schizothorax esocinus, a delicious fish belonging to family Cyprinidae. In this study, the complete mitochondrial genome of S. esocinus from Northern Pakistan was determined. The mitogenome of S. esocinus was found to be 16 591 bp in length and consisted of 13 protein coding genes, 22 tRNA genes, two rRNA genes, and one control region. All genes were encoded on heavy strain except ND6 and few tRNA genes. The overall base composition was T 25.5%, C 27.0%, A 29.8% and G 17.7%, A + T content 55.3% and G + C content 47.7%. The length of control region (CR) was 938 bp and contained putative termination-associated sequence (TAS) and several conserved sequence blocks (CSB) and control region also contained a microsatellite region (TA). This is the very first study reported from a reservoir of large cold water bodies in Pakistan which have a great potential for conservation of cold water fish species. This mitogenome sequence would be useful to know the phylogenetic status of the fish.
authors.affiliation: a Department of Zoology , Hazara University , Mansehra , Pakistan and.|b Laboratory of Biological Invasion and Adaptive Evolution , Institute of Hydrobiology, Chinese Academy of Sciences , Wuhan , Hubei , PR China.
authors.forename: Muhammad
authors.initials: M
authors.lastname: Fiaz Khan
authors.affiliation: a Department of Zoology , Hazara University , Mansehra , Pakistan and.
authors.forename: Muhammad
authors.initials: M
authors.lastname: Nasir Khan Khattak
authors.affiliation: b Laboratory of Biological Invasion and Adaptive Evolution , Institute of Hydrobiology, Chinese Academy of Sciences , Wuhan , Hubei , PR China.
authors.forename: Dekui
authors.initials: D
authors.lastname: He
authors.affiliation: b Laboratory of Biological Invasion and Adaptive Evolution , Institute of Hydrobiology, Chinese Academy of Sciences , Wuhan , Hubei , PR China.
authors.forename: Yangyang
authors.initials: Y
authors.lastname: Liang
authors.affiliation: b Laboratory of Biological Invasion and Adaptive Evolution , Institute of Hydrobiology, Chinese Academy of Sciences , Wuhan , Hubei , PR China.
authors.forename: Chunhua
authors.initials: C
authors.lastname: Li
authors.affiliation: a Department of Zoology , Hazara University , Mansehra , Pakistan and.
authors.forename: Farman
authors.initials: F
authors.lastname: Ullah Dawar
authors.affiliation: b Laboratory of Biological Invasion and Adaptive Evolution , Institute of Hydrobiology, Chinese Academy of Sciences , Wuhan , Hubei , PR China.
authors.forename: Yifeng
authors.initials: Y
authors.lastname: Chen
mesh_terms: D000818:Animals; D001482:Base Composition; D003530:Cyprinidae / Q000235:genetics*; D019143:Evolution, Molecular; D029941:Fish Proteins / Q000235:genetics; D020459:Genes, rRNA; D054629:Genome, Mitochondrial; D024101:Mitochondrial Proteins / Q000235:genetics; D010154:Pakistan; D010802:Phylogeny; D012343:RNA, Transfer / Q000235:genetics; D000073336:Whole Genome Sequencing
chemical_list: D029941:Fish Proteins; D024101:Mitochondrial Proteins; D012343:RNA, Transfer
keywords: Mitochondrial genome; Pakistan; Schizothoracinae; Schizothorax esocinus