title: Association between DNA hypomethylation at IL13 gene and allergic rhinitis in house dust mite-sensitized subjects.
abstract: BACKGROUND
  Allergic rhinitis (AR) is a complex disease, in which gene-environment interactions contribute to its pathogenesis. Epigenetic modifications such as DNA methylation play an important role in the regulation of gene function. As IL13, a pleiotropic cytokine, may be important in conferring susceptibility to AR, the aim of the present work was to assess the relationship between a CpG island methylation status at the upstream of IL13 gene and house dust mite (HDM)-sensitized AR in Han Chinese subjects.
  
  
  METHODS
  A total of 60 patients with HDM-sensitized AR and 65 control subjects were enrolled as two independent cohorts from Beijing and Liaoning. MassARRAY EpiTYPER and pyrosequencing was used to systematically screen the status of DNA methylation in peripheral blood leucocytes. IL13 mRNA expression was measured by real-time quantitative PCR. Electrophoretic mobility shift assay was used to assess the function of methylation site.
  
  
  RESULTS
  The mean level of methylation was decreased in the AR patient group compared with the control group (P = 0.01). Two of a total of 33 IL13CpG units analysed (CpG units 24 : 25 : 26 and 38 : 39) showed significant differences in methylation status between the AR patient group and the control group, with DNA hypomethylation at CpG38 significantly associated with higher risk of HDM-sensitized AR in both independent cohorts and a combined cohort (Beijing: OR = 1.24, 95%CI = 1.01-1.52, P = 0.036; Liaoning: OR = 1.62, 95%CI = 1.11-2.38, P = 0.013; Combined: OR = 1.31, 95%CI = 1.10-1.56, P = 0.002). Methylation level of CpG38 correlated negatively with both IL13 mRNA expression and serum total IgE level and affected the binding affinity of SP1.
  
  
  CONCLUSIONS
  DNA hypomethylation of IL13 gene may be associated with increased risk of AR from HDM sensitization.
authors.affiliation: Department of Otolaryngology Head and Neck Surgery, Beijing TongRen Hospital, Capital Medical University, Beijing, China.|Beijing Key Laboratory of Nasal diseases, Beijing Institute of Otolaryngology, Beijing, China.
authors.forename: J Y
authors.initials: JY
authors.lastname: Li
authors.affiliation: Department of Otolaryngology Head and Neck Surgery, Beijing TongRen Hospital, Capital Medical University, Beijing, China.|Beijing Key Laboratory of Nasal diseases, Beijing Institute of Otolaryngology, Beijing, China.|Department of Allergy, Beijing TongRen Hospital, Capital Medical University, Beijing, China.
authors.forename: Y
authors.initials: Y
authors.lastname: Zhang
authors.affiliation: Center of Allergy and Immunotherapy, The General Hospital of Shenyang Military Command, Shenyang, China.
authors.forename: X P
authors.initials: XP
authors.lastname: Lin
authors.affiliation: Beijing Key Laboratory of Nasal diseases, Beijing Institute of Otolaryngology, Beijing, China.
authors.forename: Y
authors.initials: Y
authors.lastname: Ruan
authors.affiliation: Beijing Key Laboratory of Nasal diseases, Beijing Institute of Otolaryngology, Beijing, China.
authors.forename: Y
authors.initials: Y
authors.lastname: Wang
authors.affiliation: Department of Otolaryngology Head and Neck Surgery, Beijing TongRen Hospital, Capital Medical University, Beijing, China.|Beijing Key Laboratory of Nasal diseases, Beijing Institute of Otolaryngology, Beijing, China.|Department of Allergy, Beijing TongRen Hospital, Capital Medical University, Beijing, China.
authors.forename: C S
authors.initials: CS
authors.lastname: Wang
authors.affiliation: Department of Otolaryngology Head and Neck Surgery, Beijing TongRen Hospital, Capital Medical University, Beijing, China.|Beijing Key Laboratory of Nasal diseases, Beijing Institute of Otolaryngology, Beijing, China.|Department of Allergy, Beijing TongRen Hospital, Capital Medical University, Beijing, China.
authors.forename: L
authors.initials: L
authors.lastname: Zhang
mesh_terms: D000293:Adolescent; D000328:Adult; D000818:Animals; D044466:Asian People / Q000235:genetics; D001483:Base Sequence; D015331:Cohort Studies; D018899:CpG Islands / Q000235:genetics; D019175:DNA Methylation; D024202:Electrophoretic Mobility Shift Assay; D005260:Female; D005434:Flow Cytometry; D059647:Gene-Environment Interaction; D020022:Genetic Predisposition to Disease / Q000235:genetics*; D005838:Genotype; D006801:Humans; D018793:Interleukin-13 / Q000235:genetics*; D008297:Male; D008875:Middle Aged; D008969:Molecular Sequence Data; D039981:Pyroglyphidae / Q000276:immunology*; D060888:Real-Time Polymerase Chain Reaction; D012221:Rhinitis, Allergic, Perennial / Q000235:genetics* / Q000276:immunology; D019032:Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; D055815:Young Adult
chemical_list: D018793:Interleukin-13
keywords: DNA hypomethylation; Han Chinese; IL13; epigenetic; house dust mite-sensitized allergic rhinitis