title: The Role of Crowding Forces in Juxtaposing β-Globin Gene Domain Remote Regulatory Elements in Mouse Erythroid Cells.
abstract: The extremely high concentration of macromolecules in a eukaryotic cell nucleus indicates that the nucleoplasm is a crowded macromolecular solution in which large objects tend to gather together due to crowding forces. It has been shown experimentally that crowding forces support the integrity of various nuclear compartments. However, little is known about their role in control of chromatin dynamics in vivo. Here, we experimentally addressed the possible role of crowding forces in spatial organization of the eukaryotic genome. Using the mouse β-globin domain as a model, we demonstrated that spatial juxtaposition of the remote regulatory elements of this domain in globin-expressing cells may be lost and restored by manipulation of the level of macromolecular crowding. In addition to proving the role of crowding forces in shaping interphase chromatin, our results suggest that the folding of the chromatin fiber is a major determinant in juxtaposing remote genomic elements.
authors.affiliation: Institute of Gene Biology of the Russian Academy of Sciences, Vavilov Street 34/5, 119334, Moscow, Russia.
authors.forename: Arkadiy K
authors.initials: AK
authors.lastname: Golov
authors.affiliation: Institute of Gene Biology of the Russian Academy of Sciences, Vavilov Street 34/5, 119334, Moscow, Russia.
authors.forename: Alexey A
authors.initials: AA
authors.lastname: Gavrilov
authors.affiliation: Institute of Gene Biology of the Russian Academy of Sciences, Vavilov Street 34/5, 119334, Moscow, Russia; Molecular Biology Department, Biological Faculty, Lomonosov Moscow State University, 119992, Moscow, Russia.
authors.forename: Sergey V
authors.initials: SV
authors.lastname: Razin
mesh_terms: D000818:Animals; D002467:Cell Nucleus / Q000235:genetics / Q000378:metabolism*; D002843:Chromatin / Q000378:metabolism; D041905:Erythroid Cells / Q000378:metabolism*; D051379:Mice; D011401:Promoter Regions, Genetic; D012045:Regulatory Sequences, Nucleic Acid; D055544:beta-Globins / Q000235:genetics / Q000378:metabolism*
chemical_list: D002843:Chromatin; D055544:beta-Globins