title: Microscopic observation of magnetic bacteria in the magnetic field of a rotating permanent magnet.
abstract: Magnetotactic bacteria are ubiquitous and can be found in both freshwater and marine environments. Due to intracellular chains of magnetic single domain particles, they behave like swimming compass needles. In external magnetic fields like the Earth's magnetic field, a torque is acting on the chain. This will cause the bacterium to be rotated and aligned with the external field. The swimming direction of magnetotactic bacteria can be controlled with external magnetic fields, which makes it convenient to study them under a light microscope. Usually, a special set of coils arranged around a light microscope is used to control the swimming magnetotactic bacteria. Here, we present a simple mechanical system with a permanent magnet, which produces a rotating magnetic field of nearly constant amplitude in the focal plane of a light microscope. The device is placed beside the light microscope and easily adaptable to almost any microscope and thus convenient for field experiments. To describe the trajectories qualitatively, a theoretical model of the trajectories is presented. This device can be used to control the swimming direction of magnetotactic bacteria and also for studying their magnetic and hydrodynamic properties.
authors.affiliation: Department of Earth and Environmental Science, Ludwig-Maximilians-Universität, Munich, Germany.
authors.forename: Pieter
authors.initials: P
authors.lastname: Smid
authors.affiliation: Geophysical Observatory Borok IFZ RAS, Borok, Russia.
authors.forename: Valeriy
authors.initials: V
authors.lastname: Shcherbakov
authors.affiliation: Department of Earth and Environmental Science, Ludwig-Maximilians-Universität, Munich, Germany.
authors.forename: Nikolai
authors.initials: N
authors.lastname: Petersen
mesh_terms: D001419:Bacteria; D060526:Magnetic Fields; D059346:Magnets; D055595:Mechanical Phenomena; D008853:Microscopy / Q000295:instrumentation*; D012399:Rotation