title: Complete mitochondrial genome of the greater bandicoot rat Bandicota indica (Rodentia: Muridae).
abstract: The complete mitochondrial genome of the greater bandicoot rat (Bandicota indica) was first sequenced and characterized. The genome was 16 326 bp in length, the composition and arrangement of its genes were analogous to other rodents. To confirm the phylogenetic position of B. indica, the mitochondrial nucleotide sequence data of other 20 Rodentia species were used to construct phylogenetic tree by maximum likelihood. Phylogenetic analysis demonstrated that genera Bandicota and Rattus were sister taxa, and B. indica was closer to the genus Rattus than to genera Niviventer and Leopoldamys. The mitochondrial genome of B. indica presented in this study can provide useful information for species delimitation, taxonomic and phylogenetic analyses as well as other studies of the species.
authors.affiliation: a Marine College, Shandong University , Weihai , China and.
authors.forename: Sihu
authors.initials: S
authors.lastname: Wang
authors.affiliation: a Marine College, Shandong University , Weihai , China and.
authors.forename: Haiyan
authors.initials: H
authors.lastname: Cong
authors.affiliation: a Marine College, Shandong University , Weihai , China and.
authors.forename: Lingming
authors.initials: L
authors.lastname: Kong
authors.affiliation: b The Kyoto University Museum, Kyoto University , Kyoto , Japan.
authors.forename: Masaharu
authors.initials: M
authors.lastname: Motokawa
authors.affiliation: a Marine College, Shandong University , Weihai , China and.
authors.forename: Yuchun
authors.initials: Y
authors.lastname: Li
mesh_terms: D000818:Animals; D001482:Base Composition / Q000235:genetics; D001483:Base Sequence / Q000235:genetics; D005075:Biological Evolution; D004272:DNA, Mitochondrial / Q000235:genetics*; D023061:Gene Order; D050259:Genes, Mitochondrial / Q000235:genetics; D016678:Genome / Q000235:genetics; D054629:Genome, Mitochondrial / Q000235:genetics*; D008928:Mitochondria / Q000235:genetics; D051189:Murinae / Q000235:genetics*; D010802:Phylogeny; D012377:Rodentia / Q000235:genetics; D017422:Sequence Analysis, DNA / Q000379:methods
chemical_list: D004272:DNA, Mitochondrial
keywords: Bandicota indica; complete mitochondrial genome; phylogenetic analysis