title: A Permutation-Randomization Approach to Test the Spatial Distribution of Plant Diseases.
abstract: The analysis of the spatial distribution of plant diseases requires the availability of trustworthy geostatistical methods. The mean distance tests (MDT) are here proposed as a series of permutation and randomization tests to assess the spatial distribution of plant diseases when the variable of phytopathological interest is categorical. A user-friendly software to perform the tests is provided. Estimates of power and type I error, obtained with Monte Carlo simulations, showed the reliability of the MDT (power > 0.80; type I error < 0.05). A biological validation on the spatial distribution of spores of two fungal pathogens causing root rot on conifers was successfully performed by verifying the consistency between the MDT responses and previously published data. An application of the MDT was carried out to analyze the relation between the plantation density and the distribution of the infection of Gnomoniopsis castanea, an emerging fungal pathogen causing nut rot on sweet chestnut. Trees carrying nuts infected by the pathogen were randomly distributed in areas with different plantation densities, suggesting that the distribution of G. castanea was not related to the plantation density. The MDT could be used to analyze the spatial distribution of plant diseases both in agricultural and natural ecosystems.
authors.affiliation: Department of Agricultural, Forest and Food Sciences, University of Torino, Largo P. Braccini 2, 10095 Grugliasco, Italy.
authors.forename: G
authors.initials: G
authors.lastname: Lione
authors.affiliation: Department of Agricultural, Forest and Food Sciences, University of Torino, Largo P. Braccini 2, 10095 Grugliasco, Italy.
authors.forename: P
authors.initials: P
authors.lastname: Gonthier
mesh_terms: D031319:Aesculus / Q000382:microbiology*; D001203:Ascomycota / Q000502:physiology*; D003198:Computer Simulation; D008954:Models, Biological; D010935:Plant Diseases / Q000382:microbiology*; D015203:Reproducibility of Results; D012984:Software