title: Asymmetrical Inheritance of Plasmids Depends on Dynamic Cellular Geometry and Volume Exclusion Effects.
abstract: The asymmetrical inheritance of plasmid DNA, as well as other cellular components, has been shown to be involved in replicative aging. In Saccharomyces cerevisiae, there is an ongoing debate regarding the mechanisms underlying this important asymmetry. Currently proposed models suggest it is established via diffusion, but differ on whether a diffusion barrier is necessary or not. However, no study so far incorporated key aspects to segregation, such as dynamic morphology changes throughout anaphase or plasmids size. Here, we determine the distinct effects and contributions of individual cellular variability, plasmid volume and moving boundaries in the asymmetric segregation of plasmids. We do this by measuring cellular nuclear geometries and plasmid diffusion rates with confocal microscopy, subsequently incorporating this data into a growing domain stochastic spatial simulator. Our modelling and simulations confirms that plasmid asymmetrical inheritance does not require an active barrier to diffusion, and provides a full analysis on plasmid size effects.
authors.affiliation: Integrative Systems Biology Unit, Okinawa Institute of Science and Technology, Onna-son, Okinawa, 904-0495, Japan.
authors.forename: Jai A
authors.initials: JA
authors.lastname: Denton
authors.affiliation: Integrative Systems Biology Unit, Okinawa Institute of Science and Technology, Onna-son, Okinawa, 904-0495, Japan.
authors.forename: Atiyo
authors.initials: A
authors.lastname: Ghosh
authors.affiliation: Integrative Systems Biology Unit, Okinawa Institute of Science and Technology, Onna-son, Okinawa, 904-0495, Japan.
authors.forename: Tatiana T
authors.initials: TT
authors.lastname: Marquez-Lago
mesh_terms: D004271:DNA, Fungal / Q000235:genetics; D004058:Diffusion; D008954:Models, Biological; D010957:Plasmids / Q000235:genetics*; D012441:Saccharomyces cerevisiae / Q000166:cytology* / Q000235:genetics*
chemical_list: D004271:DNA, Fungal