Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park.
Geobacillus sp. Y412MC52 was isolated from Obsidian Hot Spring, Yellowstone National Park, Montana, USA under permit from the National Park Service. The genome was sequenced, assembled, and annotated by the DOE Joint Genome Institute and deposited at the NCBI in December 2011 (CP002835). Based on 16S rRNA genes and average nucleotide identity, Geobacillus sp. Y412MC52 and the related Geobacillus sp. Y412MC61 appear to be members of a new species of Geobacillus. The genome of Geobacillus sp. Y412MC52 consists of one circular chromosome of 3,628,883 bp, an average G + C content of 52 % and one circular plasmid of 45,057 bp and an average G + C content of 45 %. Y412MC52 possesses arabinan, arabinoglucuronoxylan, and aromatic acid degradation clusters for degradation of hemicellulose from biomass. Transport and utilization clusters are also present for other carbohydrates including starch, cellobiose, and α- and β-galactooligosaccharides.
C5•6 Technologies Inc., Middleton, WI USA.
Phillip
P
Brumm
Oak Ridge National Laboratory, Oak Ridge, TN USA.
Miriam L
ML
Land
Oak Ridge National Laboratory, Oak Ridge, TN USA.
Loren J
LJ
Hauser
Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM USA.
Cynthia D
CD
Jeffries
Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM USA.
Yun-Juan
YJ
Chang
Lucigen Corporation, Middleton, WI USA.
David A
DA
Mead
Arabinan; Biomass; G. thermocatenulatus; Geobacillus sp. Y412MC52; Obsidian hot spring; Xylan