Genomic analysis of novel phytopathogenic Georgenia sp. strain SUB25.
A Gram positive bacterium, Georgenia sp. SUB25 was isolated from infected leaves of Solanum lycopersicum L. in Rajkot (22.30°N, 70.78°E), Gujarat, India. We sequenced and analyzed Georgenia sp. SUB25 that is novel plant pathogen using next generation sequencing platform and assembly yielded contigs representing a size of 4.84 Mb with 81 tRNAs and 88 rRNAs. The whole genome sequencing has been deposited in DDBJ/EMBL/GenBank under the accession number JNFL00000000. This genome sequence contains Type II secretion system genes, which involved in pathogenicity mechanism that may help to understand plant microbial interaction.
Centre for Advanced Studies in Plant Biotechnology and Genetic Engineering (CPBGE), Department of Biosciences, Saurashtra University, Rajkot, Gujarat, India.
Pooja P
PP
Patel
Centre for Advanced Studies in Plant Biotechnology and Genetic Engineering (CPBGE), Department of Biosciences, Saurashtra University, Rajkot, Gujarat, India.
Purvi M
PM
Rakhashiya
Centre for Advanced Studies in Plant Biotechnology and Genetic Engineering (CPBGE), Department of Biosciences, Saurashtra University, Rajkot, Gujarat, India.
Vrinda S
VS
Thaker
Georgenia; Phytopathogen; Type II secretion system; Whole genome sequencing