Bacterial tag encoded FLX titanium amplicon pyrosequencing (bTEFAP) based assessment of prokaryotic diversity in metagenome of Lonar soda lake, India.
Bacterial diversity and archaeal diversity in metagenome of the Lonar soda lake sediment were assessed by bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP). Metagenome comprised 5093 sequences with 2,531,282 bp and 53 ± 2% G + C content. Metagenome sequence data are available at NCBI under the Bioproject database with accession no. PRJNA218849. Metagenome sequence represented the presence of 83.1% bacterial and 10.5% archaeal origin. A total of 14 different bacteria demonstrating 57 species were recorded with dominating species like Coxiella burnetii (17%), Fibrobacter intestinalis (12%) and Candidatus Cloacamonas acidaminovorans (11%). Occurrence of two archaeal phyla representing 24 species, among them Methanosaeta harundinacea (35%), Methanoculleus chikugoensis (12%) and Methanolinea tarda (11%) were dominating species. Significant presence of 11% sequences as an unclassified indicated the possibilities for unknown novel prokaryotes from the metagenome.
Department of Biotechnology, Veer Narmad South Gujarat University, Surat, Gujarat, India.
Pravin
P
Dudhagara
Department of Microbiology, Shree Ramkrishna Institute of Computer Education and Applied Sciences, Surat, India.
Anjana
A
Ghelani
Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, India.
Rajesh
R
Patel
Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, India.
Rajesh
R
Chaudhari
Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, India.
Shreyas
S
Bhatt
Archaea; Bacteria; Lonar soda lake; Metagenome; Prokaryotic diversity; bTEFAP