A distinct pathway for tetrahymanol synthesis in bacteria.
Tetrahymanol is a polycyclic triterpenoid lipid first discovered in the ciliate Tetrahymena pyriformis whose potential diagenetic product, gammacerane, is often used as a biomarker for water column stratification in ancient ecosystems. Bacteria are also a potential source of tetrahymanol, but neither the distribution of this lipid in extant bacteria nor the significance of bacterial tetrahymanol synthesis for interpreting gammacerane biosignatures is known. Here we couple comparative genomics with genetic and lipid analyses to link a protein of unknown function to tetrahymanol synthesis in bacteria. This tetrahymanol synthase (Ths) is found in a variety of bacterial genomes, including aerobic methanotrophs, nitrite-oxidizers, and sulfate-reducers, and in a subset of aquatic and terrestrial metagenomes. Thus, the potential to produce tetrahymanol is more widespread in the bacterial domain than previously thought. However, Ths is not encoded in any eukaryotic genomes, nor is it homologous to eukaryotic squalene-tetrahymanol cyclase, which catalyzes the cyclization of squalene directly to tetrahymanol. Rather, heterologous expression studies suggest that bacteria couple the cyclization of squalene to a hopene molecule by squalene-hopene cyclase with a subsequent Ths-dependent ring expansion to form tetrahymanol. Thus, bacteria and eukaryotes have evolved distinct biochemical mechanisms for producing tetrahymanol.
Department of Earth System Science, Stanford University, Stanford, CA 94305.
Amy B
AB
Banta
Department of Earth System Science, Stanford University, Stanford, CA 94305.
Jeremy H
JH
Wei
Department of Earth System Science, Stanford University, Stanford, CA 94305 welander@stanford.edu.
Paula V
PV
Welander
D000595:Amino Acid Sequence; D001419:Bacteria / Q000201:enzymology / Q000235:genetics* / Q000378:metabolism*; D001426:Bacterial Proteins / Q000145:classification / Q000235:genetics / Q000378:metabolism; D053898:Biosynthetic Pathways / Q000235:genetics*; D002849:Chromatography, Gas; D002853:Chromatography, Liquid; D003901:Desulfovibrio / Q000235:genetics / Q000378:metabolism; D008401:Gas Chromatography-Mass Spectrometry; D005816:Genetic Complementation Test; D016680:Genome, Bacterial / Q000235:genetics; D019751:Intramolecular Transferases / Q000235:genetics / Q000378:metabolism; D054892:Metagenome / Q000235:genetics; D008772:Methylococcaceae / Q000235:genetics / Q000378:metabolism; D008969:Molecular Sequence Data; D015394:Molecular Structure; D009154:Mutation; D010802:Phylogeny; D017386:Sequence Homology, Amino Acid; D014315:Triterpenes / Q000737:chemistry / Q000378:metabolism*
D001426:Bacterial Proteins; D014315:Triterpenes; C028765:diploptene; C100046:tetrahymanol; D019751:Intramolecular Transferases; C066630:squalene-hopene cyclase
biomarkers; gammacerane; methanotrophs; sterols; tetrahymanol