title: Avoiding abundance bias in the functional annotation of post-translationally modified proteins.
authors.affiliation: Department of Proteomics, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
authors.forename: Christian
authors.identifier: http://orcid.org/0000-0002-1633-2072
authors.initials: C
authors.lastname: Schölz
authors.affiliation: Department of Disease Systems Biology, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
authors.forename: David
authors.initials: D
authors.lastname: Lyon
authors.affiliation: Department of Disease Systems Biology, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
authors.forename: Jan C
authors.initials: JC
authors.lastname: Refsgaard
authors.affiliation: Department of Disease Systems Biology, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
authors.forename: Lars Juhl
authors.initials: LJ
authors.lastname: Jensen
authors.affiliation: Department of Proteomics, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
authors.forename: Chunaram
authors.initials: C
authors.lastname: Choudhary
authors.affiliation: Department of Proteomics, The Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
authors.forename: Brian T
authors.initials: BT
authors.lastname: Weinert
mesh_terms: D000465:Algorithms; D019295:Computational Biology / Q000379:methods; D006367:HeLa Cells; D006801:Humans; D013058:Mass Spectrometry / Q000379:methods; D010766:Phosphorylation; D011499:Protein Processing, Post-Translational; D011506:Proteins / Q000737:chemistry; D020543:Proteome; D040901:Proteomics / Q000379:methods; D012441:Saccharomyces cerevisiae / Q000737:chemistry; D012984:Software; D025801:Ubiquitin / Q000737:chemistry
chemical_list: D011506:Proteins; D020543:Proteome; D025801:Ubiquitin