title: Functionally Distinct Bacterial Cytochrome c Peroxidases Proceed through a Common (Electro)catalytic Intermediate.
abstract: The diheme cytochrome c peroxidase from Shewanella oneidensis (So CcP) requires a single electron reduction to convert the oxidized, as-isolated enzyme to an active conformation. We employ protein film voltammetry to investigate the mechanism of hydrogen peroxide turnover by So CcP. When the enzyme is poised in the active state by incubation with sodium l-ascorbate, the graphite electrode specifically captures a highly active state that turns over peroxide in a high potential regime. This is the first example of an on-pathway catalytic intermediate observed for a bacterial diheme cytochrome c peroxidase that requires reductive activation, consistent with the observed voltammetric response from the diheme cytochrome c peroxidase from Nitrosomonas europaea (Ne), which is constitutively active and does not require the same one electron activation. Mutational analysis at the active site of So CcP confirms that the rate-limiting step involves a proton-coupled single electron reduction of a high valent iron species centered on the low-potential heme, consistent with the same mutation in Ne CcP. The pH dependence of catalysis for wild-type So CcP suggests that reduction shifts the pK(a)'s of at least two amino acids. Mutation of His81 in "loop 1", a surface exposed loop thought to shift conformation during the reductive activation process, eliminated one of the pH dependent features, confirming that the loop 1 shifts, changing the environment of His81 during the rate-limiting step. The observed catalytic intermediate has the same electron stoichiometry and similar pH dependence to that previously reported for Ne CcP, which is constitutively active and therefore hypothesized to follow a different catalytic mechanism. The prominent similarities between the rate-limiting steps of differing mechanistic classes of bCcPs suggest unexpected similarities in the intermediates formed.
authors.affiliation: Department of Chemistry, Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States.
authors.forename: Katherine E
authors.initials: KE
authors.lastname: Frato
authors.affiliation: Department of Chemistry, Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States.|Molecular Biology, Cell Biology, and Biochemistry Program, Boston University , 5 Cummington Mall, Boston, Massachusetts 02215, United States.
authors.forename: Kelly A
authors.initials: KA
authors.lastname: Walsh
authors.affiliation: Department of Chemistry, Boston University , 590 Commonwealth Avenue, Boston, Massachusetts 02215, United States.|Molecular Biology, Cell Biology, and Biochemistry Program, Boston University , 5 Cummington Mall, Boston, Massachusetts 02215, United States.
authors.forename: Sean J
authors.initials: SJ
authors.lastname: Elliott
mesh_terms: D020134:Catalytic Domain; D003578:Cytochrome-c Peroxidase / Q000737:chemistry / Q000378:metabolism*; D004579:Electron Transport; D006861:Hydrogen Peroxide / Q000378:metabolism*; D006863:Hydrogen-Ion Concentration; D008958:Models, Molecular; D043370:Nitrosomonas europaea / Q000737:chemistry / Q000201:enzymology* / Q000378:metabolism; D010084:Oxidation-Reduction; D020592:Shewanella / Q000737:chemistry / Q000201:enzymology* / Q000378:metabolism
chemical_list: D006861:Hydrogen Peroxide; D003578:Cytochrome-c Peroxidase