title: Intermolecular Interactions in Crystalline Theobromine as Reflected in Electron Deformation Density and (13)C NMR Chemical Shift Tensors.
abstract: An understanding of the role of intermolecular interactions in crystal formation is essential to control the generation of diverse crystalline forms which is an important concern for pharmaceutical industry. Very recently, we reported a new approach to interpret the relationships between intermolecular hydrogen bonding, redistribution of electron density in the system, and NMR chemical shifts (Babinský et al. J. Phys. Chem. A, 2013, 117, 497). Here, we employ this approach to characterize a full set of crystal interactions in a sample of anhydrous theobromine as reflected in (13)C NMR chemical shift tensors (CSTs). The important intermolecular contacts are identified by comparing the DFT-calculated NMR CSTs for an isolated theobromine molecule and for clusters composed of several molecules as selected from the available X-ray diffraction data. Furthermore, electron deformation density (EDD) and shielding deformation density (SDD) in the proximity of the nuclei involved in the proposed interactions are calculated and visualized. In addition to the recently reported observations for hydrogen bonding, we focus here particularly on the stacking interactions. Although the principal relations between the EDD and CST for hydrogen bonding (HB) and stacking interactions are similar, the real-space consequences are rather different. Whereas the C-H···X hydrogen bonding influences predominantly and significantly the in-plane principal component of the (13)C CST perpendicular to the HB path and the C═O···H hydrogen bonding modulates both in-plane components of the carbonyl (13)C CST, the stacking modulates the out-of-plane electron density resulting in weak deshielding (2-8 ppm) of both in-plane principal components of the CST and weak shielding (∼ 5 ppm) of the out-of-plane component. The hydrogen-bonding and stacking interactions may add to or subtract from one another to produce total values observed experimentally. On the example of theobromine, we demonstrate the power of this approach to identify and classify the intermolecular forces that govern the packing motifs in crystals and modulate the NMR CSTs.
authors.affiliation: CEITEC-Central European Institute of Technology, ‡National Center for Biomolecular Research, and §Department of Chemistry, Masaryk University , Kamenice 5/A4, CZ-62500 Brno, Czech Republic.
authors.forename: Kateřina
authors.initials: K
authors.lastname: Bouzková
authors.affiliation: CEITEC-Central European Institute of Technology, ‡National Center for Biomolecular Research, and §Department of Chemistry, Masaryk University , Kamenice 5/A4, CZ-62500 Brno, Czech Republic.
authors.forename: Martin
authors.initials: M
authors.lastname: Babinský
authors.affiliation: CEITEC-Central European Institute of Technology, ‡National Center for Biomolecular Research, and §Department of Chemistry, Masaryk University , Kamenice 5/A4, CZ-62500 Brno, Czech Republic.
authors.forename: Lucie
authors.initials: L
authors.lastname: Novosadová
authors.affiliation: CEITEC-Central European Institute of Technology, ‡National Center for Biomolecular Research, and §Department of Chemistry, Masaryk University , Kamenice 5/A4, CZ-62500 Brno, Czech Republic.
authors.forename: Radek
authors.initials: R
authors.lastname: Marek