title: Optimization of crude oil degradation by Dietzia cinnamea KA1, capable of biosurfactant production.
abstract: The aim of this study was isolation and characterization of a crude oil degrader and biosurfactant-producing bacterium, along with optimization of conditions for crude oil degradation. Among 11 isolates, 5 were able to emulsify crude oil in Minimal Salt Medium (MSM) among which one isolate, named KA1, showed the highest potency for growth rate and biodegradation. The isolate was identified as Dietzia cinnamea KA1 using morphological and biochemical characteristics and 16S rRNA gene sequencing. The optimal conditions were 510 mM NaCl, pH 9.0, 35 °C, and minimal requirement of 46.5 mM NH4 Cl and 2.10 mM NaH2 PO4 . Gravimetric test and Gas chromatography-Mass spectroscopy technique (GC-MS) showed that Dietzia cinnamea KA1 was able to utilize and degrade 95.7% of the crude oil after 5 days, under the optimal conditions. The isolate was able to grow and produce biosurfactant when cultured in MSM supplemented with crude oil, glycerol or whey as the sole carbon sources, but bacterial growth was occurred using molasses with no biosurfactant production. This is the first report of biosurfactant production by D. cinnamea using crude oil, glycerol and whey and the first study to report a species of Dietzia degrading a wide range of hydrocarbons in a short time.
authors.affiliation: Department of Microbiology, Faculty of Biological Sciences, Shahid Beheshti University, Tehran, Iran.
authors.forename: Amirarsalan
authors.initials: A
authors.lastname: Kavynifard
authors.affiliation: Department of Microbiology, Faculty of Biological Sciences, Shahid Beheshti University, Tehran, Iran.
authors.forename: Gholamhossein
authors.initials: G
authors.lastname: Ebrahimipour
authors.affiliation: Medicinal Plants and Drugs Research Institute, Shahid Beheshti University, Tehran, Iran.
authors.forename: Alireza
authors.initials: A
authors.lastname: Ghasempour
mesh_terms: D000192:Actinomycetales / Q000302:isolation & purification / Q000378:metabolism*; D001673:Biodegradation, Environmental; D004269:DNA, Bacterial / Q000235:genetics; D005990:Glycerol / Q000378:metabolism; D006838:Hydrocarbons / Q000378:metabolism; D010578:Petroleum / Q000378:metabolism*; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D013501:Surface-Active Agents / Q000378:metabolism*; D000067796:Whey / Q000378:metabolism
chemical_list: D004269:DNA, Bacterial; D006838:Hydrocarbons; D010578:Petroleum; D012336:RNA, Ribosomal, 16S; D013501:Surface-Active Agents; D005990:Glycerol
keywords: Biosurfactant; Dietzia cinnamea KA1; GC-MS; Gravimetric test; Hydrocarbon