title: Complete genome sequence of Celeribacter marinus IMCC12053(T), the host strain of marine bacteriophage P12053L.
abstract: Isolated from coastal seawater from Yellow Sea of Korea, Celeribacter marinus IMCC12053 was used as the host bacterium for bacteriophage P12053L. Here we report the complete genome sequence of strain IMCC12053 for further study of the marine bacteriophage P12053L functional genes. Single molecule real-time technology (PacBio RSII) was used for the single circular chromosome that is 3,096,705 base pairs in length and the GC content is 56.24%. It contains 3155 ORFs with 45 tRNAs and 6 rRNAs genes. N(6)-methyladenosine patterns were also investigated for 32 unmethylated genes and intergenic regions that covered many regulators and phage genes as well as ribosomal RNA genes and tRNA genes. Cryptic N(4)-methylcytosine pattern was investigated to speculate GpC methylase activity throughout the genome. Comparative genomics with other Celeribacter genomes were carried out for polyaromatic hydrocarbon degradation, but there were no aromatic ring oxygenases in IMCC12053 when compared to Celeribacter indicus P73.
authors.affiliation: Department of Marine-Bio Convergence Science, Specialized Graduate School Science & Technology Convergence, Pukyong National University, 365 Sinseon-ro, Nam-gu, Busan 48547, Republic of Korea.
authors.forename: Jhung-Ahn
authors.initials: JA
authors.lastname: Yang
authors.affiliation: Division of Biology and Ocean Sciences, Inha University, Yong-Hyun-Dong, Nam-Gu, Incheon 22212, Republic of Korea.
authors.forename: Ilnam
authors.initials: I
authors.lastname: Kang
authors.affiliation: Department of Marine-Bio Convergence Science, Specialized Graduate School Science & Technology Convergence, Pukyong National University, 365 Sinseon-ro, Nam-gu, Busan 48547, Republic of Korea.
authors.forename: Mikyung
authors.initials: M
authors.lastname: Moon
authors.affiliation: Department of Marine-Bio Convergence Science, Specialized Graduate School Science & Technology Convergence, Pukyong National University, 365 Sinseon-ro, Nam-gu, Busan 48547, Republic of Korea; Department of LED Convergence Engineering, Specialized Graduate School Science & Technology Convergence, Pukyong National University, 365 Sinseon-ro, Nam-gu, Busan 48547, Republic of Korea.
authors.forename: Uh-Chan
authors.initials: UC
authors.lastname: Ryu
authors.affiliation: Marine Biotechnology Research Division, Korea Institute of Ocean Science & Technology, PO Box 29, Ansan 15627, Republic of Korea.
authors.forename: Kae Kyoung
authors.initials: KK
authors.lastname: Kwon
authors.affiliation: Division of Biology and Ocean Sciences, Inha University, Yong-Hyun-Dong, Nam-Gu, Incheon 22212, Republic of Korea.
authors.forename: Jang-Cheon
authors.initials: JC
authors.lastname: Cho
authors.affiliation: Department of Marine-Bio Convergence Science, Specialized Graduate School Science & Technology Convergence, Pukyong National University, 365 Sinseon-ro, Nam-gu, Busan 48547, Republic of Korea. Electronic address: marinebio@pknu.ac.kr.
authors.forename: Hyun-Myung
authors.initials: HM
authors.lastname: Oh
mesh_terms: D059001:Aquatic Organisms; D001435:Bacteriophages / Q000502:physiology*; D004269:DNA, Bacterial / Q000235:genetics; D016680:Genome, Bacterial; D041902:Rhodobacteraceae / Q000235:genetics* / Q000821:virology*; D013045:Species Specificity
chemical_list: D004269:DNA, Bacterial
keywords: Celeribacter marinus; Marine bacteriophage; P12053L; SMRT (single molecule real-time sequencing)