title: Delineating the glycoproteome of elongating cotton fiber cells.
abstract: The data presented here delineates the glycoproteome component in the elongating cotton fiber cells attained using complementary proteomic approaches followed by protein and N-linked glycosylation site identification (Kumar et al., 2013) [1]. Utilizing species specific protein sequence databases in proteomic approaches often leads to additional information that may not be obtained using cross-species databases. In this context we have reanalyzed our glycoproteome dataset with the Gossypium arboreum, Gossypium raimondii (version 2.0) and Gossypium hirsutum protein databases that has led to the identification of 21 N-linked glycosylation sites and 18 unique glycoproteins that were not reported in our previous study. The 1D PAGE and solution based glycoprotein identification data is publicly available at the ProteomeXchange Consortium via the PRIDE partner repository (Vizcaíno et al., 2013) [2] using the dataset identifier PXD000178 and the 2D PAGE based protein identification and glycopeptide approach based N-linked glycosylation site identification data is available at the ProteomeXchange Consortium via the PRIDE partner repository (Vizcaíno et al., 2013) [2] using the dataset identifier PXD002849.
authors.affiliation: Plant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
authors.forename: Saravanan
authors.initials: S
authors.lastname: Kumar
authors.affiliation: Plant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
authors.forename: Pankaj
authors.initials: P
authors.lastname: Pandey
authors.affiliation: Plant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
authors.forename: Krishan
authors.initials: K
authors.lastname: Kumar
authors.affiliation: Plant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
authors.forename: Vijayalakshmi
authors.initials: V
authors.lastname: Rajamani
authors.affiliation: National Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
authors.forename: Kethireddy Venkata
authors.initials: KV
authors.lastname: Padmalatha
authors.affiliation: National Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
authors.forename: Gurusamy
authors.initials: G
authors.lastname: Dhandapani
authors.affiliation: National Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
authors.forename: Mogilicherla
authors.initials: M
authors.lastname: Kanakachari
authors.affiliation: Plant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
authors.forename: Sadhu
authors.initials: S
authors.lastname: Leelavathi
authors.affiliation: National Research Centre on Plant Biotechnology (NRCPB), IARI, New Delhi, India.
authors.forename: Polumetla Ananda
authors.initials: PA
authors.lastname: Kumar
authors.affiliation: Plant Transformation Group, International Centre for Genetic Engineering & Biotechnology (ICGEB), New Delhi, India.
authors.forename: Vanga Siva
authors.initials: VS
authors.lastname: Reddy