title: rCGH: a comprehensive array-based genomic profile platform for precision medicine.
abstract: We present rCGH, a comprehensive array-based comparative genomic hybridization analysis workflow, integrating computational improvements and functionalities specifically designed for precision medicine. rCGH supports the major microarray platforms, ensures a full traceability and facilitates profiles interpretation and decision-making through sharable interactive visualizations.
  
  
  
  The rCGH R package is available on bioconductor (under Artistic-2.0). The aCGH-viewer is available at https://fredcommo.shinyapps.io/aCGH_viewer, and the application implementation is freely available for installation at https://github.com/fredcommo/aCGH_viewer
  
  
  
  frederic.commo@gustaveroussy.fr
  
  
  
  Supplementary data are available at Bioinformatics online.
authors.affiliation: INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Sage Bionetworks, Seattle, WA 98109, USA and.
authors.forename: Frederic
authors.initials: F
authors.lastname: Commo
authors.affiliation: Sage Bionetworks, Seattle, WA 98109, USA and.
authors.forename: Justin
authors.initials: J
authors.lastname: Guinney
authors.affiliation: INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Sage Bionetworks, Seattle, WA 98109, USA and.
authors.forename: Charles
authors.initials: C
authors.lastname: Ferté
authors.affiliation: Sage Bionetworks, Seattle, WA 98109, USA and.
authors.forename: Brian
authors.initials: B
authors.lastname: Bot
authors.affiliation: INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France.
authors.forename: Celine
authors.initials: C
authors.lastname: Lefebvre
authors.affiliation: INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Department of Medical Oncology, Gustave Roussy, Villejuif 94805, France.
authors.forename: Jean-Charles
authors.initials: JC
authors.lastname: Soria
authors.affiliation: INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Department of Medical Oncology, Gustave Roussy, Villejuif 94805, France.
authors.forename: Fabrice
authors.initials: F
authors.lastname: André
mesh_terms: D055028:Comparative Genomic Hybridization; D023281:Genomics; D006801:Humans; D057285:Precision Medicine; D012984:Software