title: The complete mitochondrial genome sequence and gene organization of the rainbow runner (Elagatis bipinnulata) (Perciformes: Carangidae).
abstract: The complete mitochondrial genome information can play an important role in species identification, phylogeny, evolution research, genetic differentiation, and diversity. Here we determined the complete mitochondrial genome sequence of Elagatis bipinnulata (Perciformes: Carangidae). This circular genome was 16 542 bp in length, and included all 37 typical mitochondrial genes, containing 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a putative control region. The gene order of E. bipinnulata was identical to that observed in most other vertebrates. Of 37 genes, 28 were encoded by heavy strand, while the other ones were encoded by light strand. According to the phylogenetic analysis based on 13 concatenated protein-coding genes, E. bipinnulata was genetically closer to the species of genus Seriola compared with any other species within Perciformes. This work can provide helpful data for further studies on population genetic diversity and molecular evolution.
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Chunyan
authors.initials: C
authors.lastname: Ma
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Hongyu
authors.initials: H
authors.lastname: Ma
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Heng
authors.initials: H
authors.lastname: Zhang
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Chunlei
authors.initials: C
authors.lastname: Feng
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Hongqing
authors.initials: H
authors.lastname: Wei
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Wei
authors.initials: W
authors.lastname: Wang
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Wei
authors.initials: W
authors.lastname: Chen
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Fengying
authors.initials: F
authors.lastname: Zhang
authors.affiliation: a Key Laboratory of East China Sea and Oceanic Fishery Resources Exploitation Ministry of Agriculture, East China Sea Fisheries Research Institute Chinese Academy of Fishery Sciences , Shanghai , China.
authors.forename: Lingbo
authors.initials: L
authors.lastname: Ma
mesh_terms: D000818:Animals; D018387:Codon, Initiator; D018388:Codon, Terminator; D004272:DNA, Mitochondrial / Q000737:chemistry / Q000302:isolation & purification / Q000378:metabolism; D029941:Fish Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism; D023061:Gene Order; D054629:Genome, Mitochondrial; D016366:Open Reading Frames / Q000235:genetics; D010473:Perciformes / Q000235:genetics*; D010802:Phylogeny; D012335:RNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D012343:RNA, Transfer / Q000737:chemistry / Q000235:genetics; D017422:Sequence Analysis, DNA
chemical_list: D018387:Codon, Initiator; D018388:Codon, Terminator; D004272:DNA, Mitochondrial; D029941:Fish Proteins; D012335:RNA, Ribosomal; D012343:RNA, Transfer
keywords: Complete mitogenome; Elagatis bipinnulata; genome structure; phylogeny