title: Tyr217 and His213 are important for substrate binding and hydroxylation of 3-hydroxybenzoate 6-hydroxylase from Rhodococcus jostii RHA1.
abstract: 3-Hydroxybenzoate 6-hydroxylase (3HB6H) from Rhodococcus jostii RHA1 is an NADH-specific flavoprotein monooxygenase that contains FAD as a redox-active cofactor. The enzyme catalyzes para-hydroxylation of 3-hydroxybenzoate (3HB) to form 2,5-dihydroxybenzoate (2,5-DHB). Based on the enzyme crystal structure, residue His213 is located close to the hydroxyl moiety, whereas Tyr217 is close to the carboxylate group of 3HB. Y217A and Y217S did not show any perturbation of flavin absorption upon addition of 3HB, whereas Y217F has a Kd value for 3HB binding of 7.5 mm, which is ~ 50-fold larger than that found for wild-type enzyme. The results clearly indicate that Tyr217 is necessary for substrate binding. All His213 variants can bind to 3HB with similar affinity as the wild-type enzyme and form C4a-hydroperoxy intermediate. H213S, H213D and H213E produce 2,5-DHB with yields of 28 ± 5%, 52 ± 7% and 92 ± 6%, respectively, whereas H213A cannot catalyze hydroxylation. The results indicate that the interaction between the hydroxyl group of 3HB and residue 213 is important for substrate hydroxylation. Interestingly, the hydroxylation rate constant of H213E (35 s(-1) ) is similar to that of wild-type enzyme (36 s(-1) ) and this variant has an efficiency of hydroxylation (92 ± 6%) similar to the wild-type enzyme (86 ± 2%). Difference spectra of enzyme-bound substrate suggest that 3HB binds to H213E in the phenolic form. The results indicate that His213 and Glu213 in H213E may act as a catalytic base to initiate the substrate deprotonation and facilitate the electrophilic aromatic substitution of 3HB.
authors.affiliation: Department of Biochemistry, Faculty of Dentistry, Chulalongkorn University, Bangkok, Thailand.
authors.forename: Jeerus
authors.initials: J
authors.lastname: Sucharitakul
authors.affiliation: Department of Biochemistry and Center for Excellence in Proteins and Enzyme Technology, Faculty of Science, Mahidol University, Bangkok, Thailand.
authors.forename: Dheeradhach
authors.initials: D
authors.lastname: Medhanavyn
authors.affiliation: Department of Biochemistry and Center for Excellence in Proteins and Enzyme Technology, Faculty of Science, Mahidol University, Bangkok, Thailand.
authors.forename: Danaya
authors.initials: D
authors.lastname: Pakotiprapha
authors.affiliation: Laboratory of Biochemistry, Wageningen University, The Netherlands.
authors.forename: Willem J H
authors.initials: WJ
authors.lastname: van Berkel
authors.affiliation: Department of Biochemistry and Center for Excellence in Proteins and Enzyme Technology, Faculty of Science, Mahidol University, Bangkok, Thailand.
authors.forename: Pimchai
authors.initials: P
authors.lastname: Chaiyen
mesh_terms: D001426:Bacterial Proteins / Q000737:chemistry*; D002384:Catalysis; D020134:Catalytic Domain; D005420:Flavoproteins / Q000737:chemistry*; D005841:Gentisates / Q000737:chemistry; D006639:Histidine / Q000737:chemistry*; D006900:Hydroxylation; D007700:Kinetics; D006899:Mixed Function Oxygenases / Q000737:chemistry*; D010084:Oxidation-Reduction; D010100:Oxygen / Q000737:chemistry; D011485:Protein Binding; D011487:Protein Conformation; D012240:Rhodococcus / Q000201:enzymology*; D013379:Substrate Specificity; D013696:Temperature; D013816:Thermodynamics; D014443:Tyrosine / Q000737:chemistry*
chemical_list: D001426:Bacterial Proteins; D005420:Flavoproteins; D005841:Gentisates; D014443:Tyrosine; D006639:Histidine; D006899:Mixed Function Oxygenases; C023315:3-hydroxybenzoate-6-hydroxylase; D010100:Oxygen; C010925:2,5-dihydroxybenzoic acid
keywords: 3-hydroxybenzoate 6-hydroxylase; FAD; hydroxylation; monooxygenase; pre-steady-state kinetics