title: The mitochondrial genome of Atrijuglans hetaohei Yang (Lepidoptera: Gelechioidea) and related phylogenetic analyses.
abstract: Complete mitochondrial genome sequences are of great importance for better understanding the genome-level characteristics and phylogenetic relationships among related species. In this study, the complete mitochondrial genome of Atrijuglans hetaohei Yang is sequenced and analyzed, which is 15,379bp in length (GenBank: KT581634) and contains a typical set of 13 protein-coding genes, 22 tRNA genes, two rRNA genes and a non-coding region (control region). Except for cox1 gene that is initiated by CGA codon, all protein-coding genes start with ATN codons and end with the stop codon T, TA or TAA. All tRNAs have a typical clover-leaf secondary structure, except for trnS1, of which the DHU arm could not form a stable stem-loop structure. The secondary structure of rrnL and rrnS consists of 49 helices and 33 helices, respectively. Phylogenetic analyses of the complete mitochondrial genome sequences and of the amino acid sequences for 13 mitochondrial protein-coding genes among related species support the view that A. hetaohei is more closely related to the Gelechioidea than Yponomeutoidea. This result is consistent with a previous classification based on morphology.
authors.affiliation: College of Forestry, Northwest Agriculture and Forestry University, Yangling, Shaanxi 712100, China.
authors.forename: Qiqi
authors.initials: Q
authors.lastname: Wang
authors.affiliation: College of Forestry, Northwest Agriculture and Forestry University, Yangling, Shaanxi 712100, China.
authors.forename: Zhengqing
authors.initials: Z
authors.lastname: Zhang
authors.affiliation: College of Forestry, Northwest Agriculture and Forestry University, Yangling, Shaanxi 712100, China. Electronic address: tanggh@nwsuaf.edu.cn.
authors.forename: Guanghui
authors.initials: G
authors.lastname: Tang
mesh_terms: D000818:Animals; D001483:Base Sequence; D018388:Codon, Terminator; D004272:DNA, Mitochondrial / Q000235:genetics; D054629:Genome, Mitochondrial; D007915:Lepidoptera / Q000145:classification / Q000235:genetics*; D008969:Molecular Sequence Data; D009690:Nucleic Acid Conformation; D010802:Phylogeny; D012335:RNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D012343:RNA, Transfer / Q000737:chemistry / Q000235:genetics
chemical_list: D018388:Codon, Terminator; D004272:DNA, Mitochondrial; D012335:RNA, Ribosomal; D012343:RNA, Transfer
keywords: Atrijuglans hetaohei Yang; Gene content; Mitochondrial genome; Phylogenetic analysis