title: ssDNA-Functionalized Nanoceria: A Redox-Active Aptaswitch for Biomolecular Recognition.
abstract: Quantification of biomolecular binding events is a critical step for the development of biorecognition assays for diagnostics and therapeutic applications. This paper reports the design of redox-active switches based on aptamer conjugated nanoceria for detection and quantification of biomolecular recognition. It is shown that the conformational transition state of the aptamer on nanoceria, combined with the redox properties of these particles can be used to create surface based structure switchable aptasensing platforms. Changes in the redox properties at the nanoceria surface upon binding of the ssDNA and its target analyte enables rapid and highly sensitive measurement of biomolecular interactions. This concept is demonstrated as a general applicable method to the colorimetric detection of DNA binding events. An example of a nanoceria aptaswitch for the colorimetric sensing of Ochratoxin A (OTA) and applicability to other targets is provided. The system can sensitively and selectivity detect as low as 0.15 × 10(-9) m OTA. This novel assay is simple in design and does not involve oligonucleotide labeling or elaborate nanoparticle modification steps. The proposed mechanism discovered here opens up a new way of designing optical sensing methods based on aptamer recognition. This approach can be broadly applicable to many bimolecular recognition processes and related applications.
authors: Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13699, USA.
authors: Gonca
authors: G
authors: Bülbül
authors: Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13699, USA.
authors: Akhtar
authors: A
authors: Hayat
authors: Department of Chemistry and Biomolecular Science, Clarkson University, Potsdam, NY, 13699, USA.
authors: Silvana
authors: S
authors: Andreescu
mesh_terms: D000327:Adsorption; D000818:Animals; D052157:Aptamers, Nucleotide / Q000737:chemistry*; D015374:Biosensing Techniques / Q000379:methods*; D002563:Cerium / Q000737:chemistry*; D004277:DNA, Single-Stranded / Q000737:chemistry*; D008892:Milk / Q000737:chemistry; D053758:Nanoparticles / Q000737:chemistry*; D009793:Ochratoxins / Q000032:analysis; D010084:Oxidation-Reduction
chemical_list: D052157:Aptamers, Nucleotide; D004277:DNA, Single-Stranded; D009793:Ochratoxins; C025589:ochratoxin A; D002563:Cerium; C030583:ceric oxide
keywords: biomolecular recognition; colorimetric sensing; nanoceria; ssDNA aptamer