title: The complete mitochondrial genome of Anopheles minimus (Diptera: Culicidae) and the phylogenetics of known Anopheles mitogenomes.
abstract: Anopheles minimus is an important vector of human malaria in southern China and Southeast Asia. The phylogenetics of mosquitoes has not been well resolved, and the mitochondrial genome (mtgenome) has proven to be an important marker in the study of evolutionary biology. In this study, the complete mtgenome of An. minimus was sequenced for the first time. It is 15 395 bp long and encodes 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), two ribosomal RNAs (rRNAs) and a non-coding region. The gene organization is consistent with those of known Anopheles mtgenomes. The mtgenome performs a clear bias in nucleotide composition with a positive AT-skew and a negative GC-skew. All 13 PCGs prefer to use the codon UUA (Leu), ATN as initiation codon but cytochrome-oxidase subunit 1 (COI) and ND5, with TCG and GTG, and TAA as termination codon, but COI, COII, COIII and ND4, all with the incomplete T. tRNAs have the typical clover-leaf structure, but tRNA(Ser(AGN)) is consistent with known Anopheles mtgenomes. The control region includes a conserved T-stretch and a (TA)n stretch, and has the highest A+T content at 93.1%. The phylogenetics of An. minimus with 18 other Anopheles species was constructed by maximum likelihood and Bayesian inference, based on concatenated PCG sequences. The subgenera, Cellia and Anopheles, and Nyssorhynchus and Kerteszia have mutually close relationships, respectively. The Punctulatus group and Leucosphyrus group of Neomyzomyia Series, and the Albitarsis group of Albitarsis Series were suggested to be monophyletic. The monophyletic status of the subgenera, Cellia, Anopheles, Nyssorhynchus and Kerteszia need to be further elucidated.
authors: Institute of Entomology and Molecular Biology, College of Life Sciences, Chongqing Normal University, Chongqing, China.
authors: Ya-Qiong
authors: YQ
authors: Hua
authors: Institute of Entomology and Molecular Biology, College of Life Sciences, Chongqing Normal University, Chongqing, China.
authors: Yi-Ran
authors: YR
authors: Ding
authors: Institute of Entomology and Molecular Biology, College of Life Sciences, Chongqing Normal University, Chongqing, China.
authors: Zhen-Tian
authors: ZT
authors: Yan
authors: Institute of Entomology and Molecular Biology, College of Life Sciences, Chongqing Normal University, Chongqing, China.
authors: Feng-Ling
authors: FL
authors: Si
authors: Institute of Entomology and Molecular Biology, College of Life Sciences, Chongqing Normal University, Chongqing, China.
authors: Qian-Chun
authors: QC
authors: Luo
authors: Institute of Entomology and Molecular Biology, College of Life Sciences, Chongqing Normal University, Chongqing, China.
authors: Bin
authors: B
authors: Chen
mesh_terms: D000818:Animals; D000852:Anopheles / Q000235:genetics*; D001483:Base Sequence; D001499:Bayes Theorem; D049750:Genome, Insect; D054629:Genome, Mitochondrial; D019476:Insect Proteins / Q000235:genetics; D010802:Phylogeny; D012335:RNA, Ribosomal / Q000235:genetics; D012343:RNA, Transfer / Q000235:genetics
chemical_list: D019476:Insect Proteins; D012335:RNA, Ribosomal; D012343:RNA, Transfer
keywords: Anopheles; Anopheles minimus; mitochondrial genome; phylogenetic analysis