title: The study on serum and urine of renal interstitial fibrosis rats induced by unilateral ureteral obstruction based on metabonomics and network analysis methods.
abstract: Transmission of biological information is a biochemical process of multistep cascade from genes/proteins to metabolites. However, because most metabolites reflect the terminal information of the biochemical process, it is difficult to describe the transmission process of disease information in terms of the metabolomics strategy. In this paper, by incorporating network and metabolomics methods, an integrated approach was proposed to systematically investigate and explain the molecular mechanism of renal interstitial fibrosis. Through analysis of the network, the cascade transmission process of disease information starting from genes/proteins to metabolites was putatively identified and uncovered. The results indicated that renal fibrosis was involved in metabolic pathways of glycerophospholipid metabolism, biosynthesis of unsaturated fatty acids and arachidonic acid metabolism, riboflavin metabolism, tyrosine metabolism, and sphingolipid metabolism. These pathways involve kidney disease genes such as TGF-β1 and P2RX7. Our results showed that combining metabolomics and network analysis can provide new strategies and ideas for the interpretation of pathogenesis of disease with full consideration of "gene-protein-metabolite."
authors.affiliation: School of Traditional Chinese Medicine, Guangdong Pharmaceutical University, Guangzhou, 510006, China. XZH0077@126.com.|School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China. XZH0077@126.com.
authors.forename: Zheng
authors.initials: Z
authors.lastname: Xiang
authors.affiliation: School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China.
authors.forename: Hao
authors.initials: H
authors.lastname: Sun
authors.affiliation: School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China.
authors.forename: Xiaojun
authors.initials: X
authors.lastname: Cai
authors.affiliation: School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou, 325035, China.
authors.forename: Dahui
authors.initials: D
authors.lastname: Chen
mesh_terms: D000818:Animals; D007674:Kidney Diseases / Q000097:blood* / Q000209:etiology / Q000652:urine*; D055432:Metabolomics; D051381:Rats; D017207:Rats, Sprague-Dawley; D014517:Ureteral Obstruction / Q000150:complications*
keywords: Metabonomics; Network analysis; Renal interstitial fibrosis; UPLC-Q-TOF-MS