title: Aptima HIV-1 Quant Dx--A fully automated assay for both diagnosis and quantification of HIV-1.
abstract: BACKGROUND
  Separate assays are available for diagnosis and viral load (VL) monitoring of HIV-1. Studies have shown that using a single test for both confirmatory diagnosis and VL increases linkage to care.
  
  
  OBJECTIVE
  To validate a single assay for both diagnosis and VL monitoring of HIV-1 on the fully automated Panther platform.
  
  
  METHODS
  Validate the assay by assessing specificity, sensitivity, subtype detection, seroconversion, reproducibility and linearity. Also assess diagnostic agreement with the Procleix(®) Ultrio Elite™ discriminatory assay (Procleix), and agreement of VL results (method comparison) with Ampliprep/COBAS TaqMan HIV-1 version 2.0 (CAP/CTM), using clinical samples.
  
  
  RESULTS
  The assay was specific (100%) and sensitive with a 95% limit of detection of 12 copies/mL with the 3rd WHO standards. Aptima detected HIV in seroconversion panels 6 and 11 days before p24 antigen and antibody tests, respectively. Diagnostic agreement with Procleix, was 100%. Regression analysis showed good agreement of VL results between Aptima and CAP/CTM with a slope of 1.02, intercept of 0.07, and correlation coefficient (R(2)) of 0.97. Aptima was more sensitive than CAP/CTM. Equivalent quantification was seen on testing clinical samples and isolates belonging to HIV group M, N, O and P and commercially available subtype panels. Assay results were linear (R(2) 0.9994) with standard deviation of <0.17 log copies across assay range.
  
  
  CONCLUSIONS
  The good specificity, sensitivity, precision, subtype performance and clinical agreement with other assays demonstrated by Aptima combined with the complete automation provided by the Panther platform makes Aptima a good candidate for both VL monitoring and diagnosis of HIV-1.
authors.affiliation: Hologic Incorporated, San Diego, CA, USA. Electronic address: sangeetha.nair@hologic.com.
authors.forename: Sangeetha Vijaysri
authors.initials: SV
authors.lastname: Nair
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Hee Cheol
authors.initials: HC
authors.lastname: Kim
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Jacqueline
authors.initials: J
authors.lastname: Fortunko
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Tracy
authors.initials: T
authors.lastname: Foote
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Tashi
authors.initials: T
authors.lastname: Peling
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Cuong
authors.initials: C
authors.lastname: Tran
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Charles Thomas
authors.initials: CT
authors.lastname: Nugent
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Sunghae
authors.initials: S
authors.lastname: Joo
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Youna
authors.initials: Y
authors.lastname: Kang
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Bana
authors.initials: B
authors.lastname: Wilkins
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Kristen
authors.initials: K
authors.lastname: Lednovich
authors.affiliation: Hologic Incorporated, San Diego, CA, USA.
authors.forename: Andrew
authors.initials: A
authors.lastname: Worlock
mesh_terms: D057205:Automation, Laboratory; D015658:HIV Infections / Q000175:diagnosis* / Q000821:virology*; D015497:HIV-1 / Q000235:genetics*; D025202:Molecular Diagnostic Techniques; D011933:Reagent Kits, Diagnostic; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity; D019562:Viral Load / Q000379:methods*
chemical_list: D011933:Reagent Kits, Diagnostic
keywords: Aptima; CAP/CTM; Diagnosis; HIV; Panther; Viral load