title: Genetic divergence in the common bush-tanager Chlorospingus ophthalmicus (Aves: Emberizidae) throughout Mexican cloud forests: The role of geography, ecology and Pleistocene climatic fluctuations.
abstract: By integrating mitochondrial DNA (mtDNA), microsatellites and ecological niche modelling (ENM), we investigated the phylogeography of Mexican populations of the common bush-tanager Chlorospingus ophthalmicus to examine the relative role of geographical and ecological features, as well as Pleistocene climatic oscillations in driving the diversification. We sequenced mtDNA of individuals collected throughout the species range in Mexico and genotyped them at seven microsatellite loci. Phylogeographic, population genetics and coalescent methods were used to assess patterns of genetic structure, gene flow and demographic history. ENM was used to infer contractions and expansions at different time periods as well as differences in climatic conditions among lineages. The retrieved mitochondrial and microsatellite groups correspond with the fragmented cloud forest distribution in mountain ranges and morphotectonic provinces. Differing climatic conditions between mountain ranges were detected, and palaeodistribution modelling as well as demographic history analyses, indicated recent population expansions throughout the Sierra Madre Oriental (SMO). The marked genetic structure of C. ophthalmicus was promoted by the presence of ecological and geographical barriers that restricted the movement of individuals among mountain ranges. The SMO was mainly affected by Pleistocene climatic oscillations, with the moist forests model best fitting the displayed genetic patterns of populations in this mountain range.
authors.affiliation: Departamento de Biología Evolutiva, Instituto de Ecología, AC, Xalapa, Veracruz 91070, Mexico.
authors.forename: Denisse
authors.initials: D
authors.lastname: Maldonado-Sánchez
authors.affiliation: Departamento de Biología Evolutiva, Instituto de Ecología, AC, Xalapa, Veracruz 91070, Mexico. Electronic address: carla.gutierrez@inecol.mx.
authors.forename: Carla
authors.initials: C
authors.lastname: Gutiérrez-Rodríguez
authors.affiliation: Departamento de Biología Evolutiva, Instituto de Ecología, AC, Xalapa, Veracruz 91070, Mexico.
authors.forename: Juan Francisco
authors.initials: JF
authors.lastname: Ornelas
mesh_terms: D025041:Animal Migration; D000818:Animals; D001499:Bayes Theorem; D002980:Climate; D004272:DNA, Mitochondrial / Q000235:genetics; D017753:Ecosystem; D065928:Forests; D014644:Genetic Variation; D005828:Genetics, Population; D006239:Haplotypes / Q000235:genetics; D008800:Mexico; D018895:Microsatellite Repeats / Q000235:genetics; D008928:Mitochondria / Q000235:genetics; D046109:Passeriformes / Q000235:genetics*; D010802:Phylogeny; D058974:Phylogeography; D013997:Time Factors
chemical_list: D004272:DNA, Mitochondrial
keywords: Cloud forests; Gene flow; Morphotectonic provinces; Pleistocene glaciations; Population divergence; Subspecies