title: STUDIES ON ULTRASTRUCTURE AND THREE-GENE PHYLOGENY OF THE GENUS MALLOMONAS (SYNUROPHYCEAE)(1).
abstract: The genus Mallomonas, a common and often abundant member of the planktic community in many freshwater habitats worldwide, consists of 180 species divided into 19 sections and 23 series. Classification of species is based largely on ultrastructural characteristics of the siliceous scales and bristles that collectively form a highly organized covering over the cell. However, the relative importance of the different siliceous features of the scales, such as the dome, V rib, and secondary structures, as well as the different types of scales, in understanding the evolution and phylogeny of the genus is little known. In this study, we investigated the scale and bristle ultrastructure, along with sequences of three genes, for 19 isolates (18 species) of Mallomonas (18 isolates were from Korean habitats). The isolates represented nine of the 19 sections. Sequences for both the nuclear SSU and LSU rDNA and plastid LSU of RUBISCO (rbcL) genes for each of the 19 Mallomonas isolates and four outgroups were determined. Bayesian and maximum-likelihood (ML) analyses of the data revealed that Mallomonas consists of two strongly supported clades. Mallomonas bangladeshica (E. Takah. et T. Hayak.) Siver et A. P. Wolfe was at the base of the first clade that included taxa from the sections Planae and Heterospinae, both of which lack a V rib on the shield of the scales. Our results indicated that the sections Planae and Heterospinae should be combined. The second clade, with Mallomonas insignis Penard and Mallomonas punctifera Korshikov at the base, contained taxa from the sections Mallomonas, Striatae, Akrokomae, Annulatae, Torquatae, Punctiferae, and Insignes, all of which have V ribs or well-developed marginal ribs on the scales. Sister relationships between Mallomonas and Striatae were strongly supported, but interrelations among the remaining sections were not resolved, probably due to inclusion of too few species. Our results suggest that the current classification of the genus Mallomonas at the section level will require some revision. Additional species will need to be added in future analyses.
authors.affiliation: Department of Biology, Chungnam National University, Daejeon 305-764, KoreaDepartment of Biology, Kyungpook National University, Daegu 702-701, KoreaDepartment of Botany, Connecticut College, New London, Connecticut 06320, USA.
authors.forename: Bok Yeon
authors.initials: BY
authors.lastname: Jo
authors.affiliation: Department of Biology, Chungnam National University, Daejeon 305-764, KoreaDepartment of Biology, Kyungpook National University, Daegu 702-701, KoreaDepartment of Botany, Connecticut College, New London, Connecticut 06320, USA.
authors.forename: Woongghi
authors.initials: W
authors.lastname: Shin
authors.affiliation: Department of Biology, Chungnam National University, Daejeon 305-764, KoreaDepartment of Biology, Kyungpook National University, Daegu 702-701, KoreaDepartment of Botany, Connecticut College, New London, Connecticut 06320, USA.
authors.forename: Sung Min
authors.initials: SM
authors.lastname: Boo
authors.affiliation: Department of Biology, Chungnam National University, Daejeon 305-764, KoreaDepartment of Biology, Kyungpook National University, Daegu 702-701, KoreaDepartment of Botany, Connecticut College, New London, Connecticut 06320, USA.
authors.forename: Han Soon
authors.initials: HS
authors.lastname: Kim
authors.affiliation: Department of Biology, Chungnam National University, Daejeon 305-764, KoreaDepartment of Biology, Kyungpook National University, Daegu 702-701, KoreaDepartment of Botany, Connecticut College, New London, Connecticut 06320, USA.
authors.forename: Peter A
authors.initials: PA
authors.lastname: Siver
keywords: Mallomonas; Synurophyceae; phylogeny; rbcL; ribosomal DNA; ultrastructure