title: Inflammatory and Immune Response Genes Polymorphisms are Associated with Susceptibility to Chronic Obstructive Pulmonary Disease in Tatars Population from Russia.
abstract: Chronic obstructive pulmonary disease (COPD) is a complex chronic inflammatory disease of the respiratory system affecting primarily distal respiratory pathways and lung parenchyma. This work was designed as a case-control study aimed at investigating the association of COPD with polymorphisms in inflammatory and immune response genes (JAK1, JAK3, STAT1, STAT3, NFKB1, IL17A, ADIPOQ, ADIPOR1, etc.) in Tatar population from Russia. Ten SNPs (rs310216, rs3212780, rs12693591, rs2293152, rs28362491, rs4711998, rs1974226, rs1501299, rs266729, and rs12733285) were genotyped by the real-time polymerase chain reaction (TaqMan assays) in a case-control study (425 COPD patients and 457 in the control group, from Ufa, Russia). Logistic regression was used to detect the association of SNPs in different models. Linear regression analyses were performed to estimate the relationship between SNPs and lung function parameters and pack-years. In Tatar population, significant associations of JAK1 (rs310216) (P = 0.0002, OR 1.70 in additive model), JAK3 (rs3212780) (P = 0.001, OR 1.61 in dominant model), and IL17A (rs1974226) (P = 0.0037, OR 2.31 in recessive model) with COPD were revealed. The disease risk was higher in carriers of insertion allele of NFKB1 (rs28362491) (P = 0.045, OR 1.22). We found a significant gene-by-environment interaction of smoking status and IL17A (rs1974226) (P interact = 0.016), JAK3 (rs3212780) (P interact = 0.031), ADIPOQ (rs266729) (P interact = 0.013), and ADIPOR1 (rs12733285) (P interact = 0.018). The relationship between the rs4711998, rs1974226, rs310216, rs3212780, rs28362491, and smoking pack-years was found (P = 0.045, P = 0.004, P = 0.0005, P = 0.021, and P = 0.042). A significant genotype-dependent variation of forced vital capacity was observed for NFKB1 (rs28362491) (P = 0.017), ADIPOR1 (rs12733285) (P = 0.043), and STAT1 (rs12693591) (P = 0.048). The genotypes of STAT1 (rs12693591) (P = 0.013) and JAK1 (rs310216) (P = 0.048) were associated with forced expiratory volume in 1 s.
authors.affiliation: Department of Genomics, Institute of Biochemistry and Genetics, Russian Academy of Sciences, Pr. Oktybry, 71, Ufa, Russian Federation, 450054. guly_kory@mail.ru.
authors.forename: Gulnaz Faritovna
authors.initials: GF
authors.lastname: Korytina
authors.affiliation: Department of Genomics, Institute of Biochemistry and Genetics, Russian Academy of Sciences, Pr. Oktybry, 71, Ufa, Russian Federation, 450054.
authors.forename: L Z
authors.initials: LZ
authors.lastname: Akhmadishina
authors.affiliation: Department of Genomics, Institute of Biochemistry and Genetics, Russian Academy of Sciences, Pr. Oktybry, 71, Ufa, Russian Federation, 450054.
authors.forename: O V
authors.initials: OV
authors.lastname: Kochetova
authors.affiliation: Department of Biology and Department of Internal Diseases, Bashkortostan State Medical University, Lenina st., 3, Ufa, Russian Federation, 450000.
authors.forename: Y G
authors.initials: YG
authors.lastname: Aznabaeva
authors.affiliation: Department of Biology and Department of Internal Diseases, Bashkortostan State Medical University, Lenina st., 3, Ufa, Russian Federation, 450000.
authors.forename: Sh Z
authors.initials: SZ
authors.lastname: Zagidullin
authors.affiliation: Department of Genomics, Institute of Biochemistry and Genetics, Russian Academy of Sciences, Pr. Oktybry, 71, Ufa, Russian Federation, 450054.|Department of Biology and Department of Internal Diseases, Bashkortostan State Medical University, Lenina st., 3, Ufa, Russian Federation, 450000.
authors.forename: T V
authors.initials: TV
authors.lastname: Victorova
mesh_terms: D052242:Adiponectin / Q000235:genetics; D000368:Aged; D016022:Case-Control Studies; D005260:Female; D059647:Gene-Environment Interaction; D056726:Genetic Association Studies; D020022:Genetic Predisposition to Disease / Q000208:ethnology* / Q000235:genetics; D006801:Humans; D020381:Interleukin-17 / Q000235:genetics; D053613:Janus Kinase 1 / Q000235:genetics; D053616:Janus Kinase 3 / Q000235:genetics; D008297:Male; D008875:Middle Aged; D052002:NF-kappa B p50 Subunit / Q000235:genetics; D020641:Polymorphism, Single Nucleotide; D029424:Pulmonary Disease, Chronic Obstructive / Q000208:ethnology* / Q000235:genetics*; D054419:Receptors, Adiponectin / Q000235:genetics; D012426:Russia / Q000208:ethnology; D050794:STAT1 Transcription Factor / Q000235:genetics; D050796:STAT3 Transcription Factor / Q000235:genetics
chemical_list: C499918:ADIPOQ protein, human; C475418:ADIPOR1 protein, human; D052242:Adiponectin; C508717:IL17A protein, human; D020381:Interleukin-17; D052002:NF-kappa B p50 Subunit; C489548:NFKB1 protein, human; D054419:Receptors, Adiponectin; D050794:STAT1 Transcription Factor; C494079:STAT1 protein, human; D050796:STAT3 Transcription Factor; C494086:STAT3 protein, human; C507904:JAK1 protein, human; C507933:JAK3 protein, human; D053613:Janus Kinase 1; D053616:Janus Kinase 3
keywords: Adiponectin; Association; Chronic inflammation; Chronic obstructive pulmonary disease; Cytokines; JAK/STAT-signaling