title: W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis.
abstract: This article presents W-IQ-TREE, an intuitive and user-friendly web interface and server for IQ-TREE, an efficient phylogenetic software for maximum likelihood analysis. W-IQ-TREE supports multiple sequence types (DNA, protein, codon, binary and morphology) in common alignment formats and a wide range of evolutionary models including mixture and partition models. W-IQ-TREE performs fast model selection, partition scheme finding, efficient tree reconstruction, ultrafast bootstrapping, branch tests, and tree topology tests. All computations are conducted on a dedicated computer cluster and the users receive the results via URL or email. W-IQ-TREE is available at http://iqtree.cibiv.univie.ac.at It is free and open to all users and there is no login requirement.
authors.affiliation: Center for Integrative Bioinformatics, Max F. Perutz Laboratories, University of Vienna, Medical University of Vienna, 1030 Vienna, Austria.
authors.forename: Jana
authors.initials: J
authors.lastname: Trifinopoulos
authors.affiliation: Center for Integrative Bioinformatics, Max F. Perutz Laboratories, University of Vienna, Medical University of Vienna, 1030 Vienna, Austria.
authors.forename: Lam-Tung
authors.initials: LT
authors.lastname: Nguyen
authors.affiliation: Center for Integrative Bioinformatics, Max F. Perutz Laboratories, University of Vienna, Medical University of Vienna, 1030 Vienna, Austria Bioinformatics and Computational Biology, Faculty of Computer Science, University of Vienna, 1090 Vienna, Austria.
authors.forename: Arndt
authors.initials: A
authors.lastname: von Haeseler
authors.affiliation: Center for Integrative Bioinformatics, Max F. Perutz Laboratories, University of Vienna, Medical University of Vienna, 1030 Vienna, Austria minh.bui@univie.ac.at.
authors.forename: Bui Quang
authors.initials: BQ
authors.lastname: Minh
mesh_terms: D000465:Algorithms; D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D005075:Biological Evolution; D003062:Codon; D003196:Computer Graphics / Q000706:statistics & numerical data*; D006801:Humans; D020407:Internet; D016013:Likelihood Functions; D010802:Phylogeny; D016415:Sequence Alignment; D014584:User-Computer Interface; D014714:Vertebrates / Q000145:classification* / Q000235:genetics
chemical_list: D003062:Codon