title: Sub-50 fs excited state dynamics of 6-chloroguanine upon deep ultraviolet excitation.
abstract: The photophysical properties of natural nucleobases and their respective nucleotides are ascribed to the sub-picosecond lifetime of their first singlet states in the UV-B region (260-350 nm). Electronic transitions of the ππ* type, which are stronger than those in the UV-B region, lie at the red edge of the UV-C range (100-260 nm) in all isolated nucleobases. The lowest energetic excited states in the UV-B region of nucleobases have been investigated using a plethora of experimental and theoretical methods in gas and solution phases. The sub-picosecond lifetime of these molecules is not a general attribute of all nucleobases but specific to the five primary nucleobases and a few xanthine and methylated derivatives. To determine the overall UV photostability, we aim to understand the effect of more energetic photons lying in the UV-C region on nucleobases. To determine the UV-C initiated photophysics of a nucleobase system, we chose a halogen substituted purine, 6-chloroguanine (6-ClG), that we had investigated previously using resonance Raman spectroscopy. We have performed quantitative measurements of the resonance Raman cross-section across the Bb absorption band (210-230 nm) and constructed the Raman excitation profiles. We modeled the excitation profiles using Lee and Heller's time-dependent theory of resonance Raman intensities to extract the initial excited state dynamics of 6-ClG within 30-50 fs after photoexcitation. We found that imidazole and pyrimidine rings of 6-ClG undergo expansion and contraction, respectively, following photoexcitation to the Bb state. The amount of distortions of the excited state structure from that of the ground state structure is reflected by the total internal reorganization energy that is determined at 112 cm(-1). The contribution of the inertial component of the solvent response towards the total reorganization energy was obtained at 1220 cm(-1). In addition, our simulation also yields an instantaneous response of the first solvation shell within an ultrafast timescale of less than 30 fs following photoexcitation.
authors.affiliation: Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pashan, Pune 411008, India. mrinalini@iiserpune.ac.in puranik.mrinalini@gmail.com.
authors.forename: Sayan
authors.initials: S
authors.lastname: Mondal
authors.affiliation: Indian Institute of Science Education and Research, Dr. Homi Bhabha Road, Pashan, Pune 411008, India. mrinalini@iiserpune.ac.in puranik.mrinalini@gmail.com.
authors.forename: Mrinalini
authors.initials: M
authors.lastname: Puranik
mesh_terms: D003198:Computer Simulation; D006147:Guanine / Q000031:analogs & derivatives* / Q000737:chemistry; D017785:Photons; D011743:Pyrimidines / Q000737:chemistry; D012997:Solvents; D013050:Spectrometry, Fluorescence; D013059:Spectrum Analysis, Raman; D014466:Ultraviolet Rays; D014732:Vibration
chemical_list: C517240:6-chloroguanine; D011743:Pyrimidines; D012997:Solvents; D006147:Guanine; C030986:pyrimidine