title: Genomic Analysis of the Extremely Halophilic Archaeon Halobacterium noricense CBA1132 Isolated from Solar Salt That Is an Essential Material for Fermented Foods.
abstract: The extremely halophilic archaeon Halobacterium noricense is a member of the genus Halobacterium. Strain CBA1132 (= KCCM 43183, JCM 31150) was isolated from solar salt. The genome of strain CBA1132 assembled with 4 contigs, including three rRNA genes, 44 tRNA genes, and 3,208 open reading frames. Strain CBA1132 had nine putative CRISPRs and the genome contained genes encoding metal resistance determinants: copper-translocating P-type ATPase (CtpA), arsenical pump-driving ATPase (ArsA), arsenate reductase (ArsC), and arsenical resistance operon repressor (ArsR). Strain CBA1132 was related to Halobacterium noricense, with 99.2% 16S rRNA gene sequence similarity. Based on the comparative genomic analysis, strain CBA1132 has distinctly evolved; moreover, essential genes related to nitrogen metabolism were only detected in the genome of strain CBA1132 among the reported genomes in the genus Halobacterium. This genome sequence of Halobacterium noricense CBA1132 may be of use in future molecular biological studies.
authors.affiliation: Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
authors.forename: Seul Ki
authors.initials: SK
authors.lastname: Lim
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.
authors.forename: Joon Yong
authors.initials: JY
authors.lastname: Kim
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.
authors.forename: Hye Seon
authors.initials: HS
authors.lastname: Song
authors.affiliation: Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
authors.forename: Min-Sung
authors.initials: MS
authors.lastname: Kwon
authors.affiliation: Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
authors.forename: Jieun
authors.initials: J
authors.lastname: Lee
authors.affiliation: Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
authors.forename: Young Jun
authors.initials: YJ
authors.lastname: Oh
authors.affiliation: Research Group of Gut Microbiome, Korea Food Research Institute, Seongnam 13539, Republic of Korea.
authors.forename: Young-Do
authors.initials: YD
authors.lastname: Nam
authors.affiliation: Division of Bioengineering, Incheon National University, Incheon 22012, Republic of Korea.
authors.forename: Myung-Ji
authors.initials: MJ
authors.lastname: Seo
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.
authors.forename: Dong-Gi
authors.initials: DG
authors.lastname: Lee
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.|Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon 34134, Republic of Korea.
authors.forename: Jong-Soon
authors.initials: JS
authors.lastname: Choi
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.
authors.forename: Changmann
authors.initials: C
authors.lastname: Yoon
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.|Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon 34134, Republic of Korea.
authors.forename: Eunju
authors.initials: E
authors.lastname: Sohn
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.|Graduate School of Analytical Science and Technology, Chungnam National University, Daejeon 34134, Republic of Korea.
authors.forename: Md Arif-Ur
authors.initials: MA
authors.lastname: Rahman
authors.affiliation: Biological Disaster Analysis Group, Korea Basic Science Institute, Daejeon 34133, Republic of Korea.
authors.forename: Seong Woon
authors.initials: SW
authors.lastname: Roh
authors.affiliation: Microbiology and Functionality Research Group, World Institute of Kimchi, Gwangju 61755, Republic of Korea.
authors.forename: Hak-Jong
authors.initials: HJ
authors.lastname: Choi
mesh_terms: D001482:Base Composition; D001483:Base Sequence; D064112:Clustered Regularly Interspaced Short Palindromic Repeats; D019641:DNA, Archaeal / Q000235:genetics; D005285:Fermentation; D019766:Genes, Archaeal; D020745:Genome, Archaeal; D023281:Genomics; D006217:Halobacterium / Q000235:genetics* / Q000302:isolation & purification / Q000502:physiology; D009584:Nitrogen / Q000378:metabolism; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S; D017422:Sequence Analysis, DNA; D012965:Sodium Chloride / Q000378:metabolism
chemical_list: D019641:DNA, Archaeal; D012336:RNA, Ribosomal, 16S; D012965:Sodium Chloride; D009584:Nitrogen
keywords: Haloarchaea; Halobacterium; extremely halophilic archaea; genomic analysis