title: RNA-sequencing data analysis of uterus in ovariectomized rats fed with soy protein isolate, 17β-estradiol and casein.
abstract: This data file describes the bioinformatics analysis of uterine RNA-seq data comparing genome wide effects of feeding soy protein isolate compared to casein to ovariectomized female rats age 64 days relative to treatment of casein fed rats with 5 μg/kg/d estradiol and relative to rats treated with estradiol and also fed soy protein isolate. Complete raw data files were deposited in the gene Expression Omnibus (GEO) at NCBI (http:/www.ncbi.nlm.nih.gov.geo/) under the GEO accession number GEO: GSE69819. Data presented here incudes a summary of the differential expression analysis with top 30 genes up- and down-regulated by soy protein isolate (SPI), estradiol (E2) and SPI+E2. Additional functional annotation analysis of KEGG pathways is also presented for each treatment, together with networks of interaction between those pathways. Further interpretation and discussion of this data can be found in the article "Uterine responses to feeding soy protein isolate and treatment with 17β-estradiol differ in ovariectomized female rats" Ronis et al. (2016) [1].
authors.affiliation: Department of Pharmacology & Experimental Therapeutics, LSUHSC-New Orelans, New Orleans, LA, United States; Arkansas Children's Nutrition Center, Little Rock, AR, United States.
authors.forename: Martin J
authors.initials: MJ
authors.lastname: Ronis
authors.affiliation: Arkansas Children's Nutrition Center, Little Rock, AR, United States; Department of Biomedical Informatics, UAMS, Little Rock, AR, United States.
authors.forename: Horacio
authors.initials: H
authors.lastname: Gomez-Acevedo
authors.affiliation: Arkansas Children's Nutrition Center, Little Rock, AR, United States.
authors.forename: Michael L
authors.initials: ML
authors.lastname: Blackburn
authors.affiliation: Arkansas Children's Nutrition Center, Little Rock, AR, United States.
authors.forename: Mario A
authors.initials: MA
authors.lastname: Cleves
authors.affiliation: Arkansas Children's Nutrition Center, Little Rock, AR, United States.
authors.forename: Rohit
authors.initials: R
authors.lastname: Singhal
authors.affiliation: Arkansas Children's Nutrition Center, Little Rock, AR, United States.
authors.forename: Thomas M
authors.initials: TM
authors.lastname: Badger