title: The complete chloroplast genome of Lilium distichum Nakai (Liliaceae).
abstract: Lilium distichum is a native lily species in Korea, northeastern China and far eastern Russia. The complete chloroplast genome sequence of L. distichum was generated by de novo assembly using whole genome next generation sequences. The chloroplast genome of L. distichum was 152 598 bp in length and divided into four distinct regions, such as large single copy region (82 031 bp), small single copy region (17 487 bp) and a pair of inverted repeat regions (26 540 bp). The genome annotation predicted a total of 112 genes, including 78 protein-coding genes, 30 tRNA genes,and 4 rRNA genes. Phylogenetic analysis with the reported chloroplast genomes revealed that L. distichum is most closely related to L. superbum (Turk's-cap lily).
authors.affiliation: a Department of Life Science , Sahmyook University , Seoul , Republic of Korea.
authors.forename: Yoon-Jung
authors.initials: YJ
authors.lastname: Hwang
authors.affiliation: b Department of Plant Science , Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University , Seoul , Republic of Korea.
authors.forename: Sang-Choon
authors.initials: SC
authors.lastname: Lee
authors.affiliation: b Department of Plant Science , Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University , Seoul , Republic of Korea.|c Phyzen Genomics Institute , Seoul , Republic of Korea.
authors.forename: Kyunghee
authors.initials: K
authors.lastname: Kim
authors.affiliation: c Phyzen Genomics Institute , Seoul , Republic of Korea.
authors.forename: Beom-Soon
authors.initials: BS
authors.lastname: Choi
authors.affiliation: b Department of Plant Science , Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University , Seoul , Republic of Korea.
authors.forename: Jee Young
authors.initials: JY
authors.lastname: Park
authors.affiliation: b Department of Plant Science , Plant Genomics and Breeding Institute, and Research Institute of Agriculture and Life Sciences, College of Agriculture and Life Sciences, Seoul National University , Seoul , Republic of Korea.
authors.forename: Tae-Jin
authors.initials: TJ
authors.lastname: Yang
authors.affiliation: d Department of Horticultural Science , Kyungpook National University , Daegu , Republic of Korea.
authors.forename: Ki-Byung
authors.initials: KB
authors.lastname: Lim
mesh_terms: D002736:Chloroplasts / Q000235:genetics*; D018742:DNA, Chloroplast / Q000737:chemistry / Q000302:isolation & purification / Q000378:metabolism; D054628:Genome, Chloroplast; D059014:High-Throughput Nucleotide Sequencing; D055029:Inverted Repeat Sequences / Q000235:genetics; D027762:Lilium / Q000145:classification / Q000235:genetics*; D010802:Phylogeny; D010940:Plant Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism; D012335:RNA, Ribosomal / Q000737:chemistry / Q000235:genetics; D012343:RNA, Transfer / Q000737:chemistry / Q000235:genetics; D017422:Sequence Analysis, DNA
chemical_list: D018742:DNA, Chloroplast; D010940:Plant Proteins; D012335:RNA, Ribosomal; D012343:RNA, Transfer
keywords: Chloroplast; Lilium distichum; lily; genome sequence