title: Efficacy of DNA barcoding for the species identification of spiders from Western Ghats of India.
abstract: DNA barcoding has emerged as an additional tool for taxonomy and as an aid to taxonomic impediments. Due to their extensive morphological variation, spiders are taxonomically challenging. Therefore, all over the world, attempts are being made to DNA barcode species of spiders. Till now no attempts were made to DNA barcode Indian spiders despite their rich diversity. We have generated DNA barcodes for 60 species (n = 112) of spiders for the first time from India. Although only 17 species were correctly identified at the species level, DNA barcoding correctly discriminated 99% of the species studied here. We have also found high intraspecies nucleotide divergence in Plexippus paykulli suggesting cryptic diversity that needs to be studied in detail. Our study also showed non-specific amplification of the Cytochrome Oxidase I (COI) gene of endosymbiont bacteria Wolbachia. However, these cases are very rare and could be resolved by the use of modified or group specific primers.
authors.affiliation: a Microbial Culture Collection (MCC) , Pune , Maharashtra , India.
authors.forename: Swapnil
authors.initials: S
authors.lastname: Gaikwad
authors.affiliation: a Microbial Culture Collection (MCC) , Pune , Maharashtra , India.
authors.forename: Ashwin
authors.initials: A
authors.lastname: Warudkar
authors.affiliation: a Microbial Culture Collection (MCC) , Pune , Maharashtra , India.
authors.forename: Yogesh
authors.initials: Y
authors.lastname: Shouche
mesh_terms: D000818:Animals; D058893:DNA Barcoding, Taxonomic / Q000379:methods*; D003576:Electron Transport Complex IV / Q000235:genetics; D014644:Genetic Variation; D007194:India; D010802:Phylogeny; D017422:Sequence Analysis, DNA / Q000379:methods*; D013045:Species Specificity; D013112:Spiders / Q000145:classification* / Q000201:enzymology / Q000235:genetics
chemical_list: D003576:Electron Transport Complex IV; C581860:cytochrome c oxidase subunit I, human
keywords: Araneae; COI; Wolbachia; mislabelling; species identification