title: Optimizing Flip Angles for Metabolic Rate Estimation in Hyperpolarized Carbon-13 MRI.
abstract: Hyperpolarized carbon-13 magnetic resonance imaging has enabled the real-time observation of perfusion and metabolism in vivo. These experiments typically aim to distinguish between healthy and diseased tissues based on the rate at which they metabolize an injected substrate. However, existing approaches to optimizing flip angle sequences for these experiments have focused on indirect metrics of the reliability of metabolic rate estimates, such as signal variation and signal-to-noise ratio. In this paper we present an optimization procedure that focuses on maximizing the Fisher information about the metabolic rate. We demonstrate through numerical simulation experiments that flip angles optimized based on the Fisher information lead to lower variance in metabolic rate estimates than previous flip angle sequences. In particular, we demonstrate a 20% decrease in metabolic rate uncertainty when compared with the best competing sequence. We then demonstrate appropriateness of the mathematical model used in the simulation experiments with in vivo experiments in a prostate cancer mouse model. While there is no ground truth against which to compare the parameter estimates generated in the in vivo experiments, we demonstrate that our model used can reproduce consistent parameter estimates for a number of flip angle sequences.
authors.forename: John
authors.initials: J
authors.lastname: Maidens
authors.forename: Jeremy W
authors.initials: JW
authors.lastname: Gordon
authors.forename: Murat
authors.initials: M
authors.lastname: Arcak
authors.forename: Peder E Z
authors.initials: PE
authors.lastname: Larson
mesh_terms: D000465:Algorithms; D000818:Animals; D002247:Carbon Isotopes / Q000032:analysis / Q000378:metabolism*; D003198:Computer Simulation; D004195:Disease Models, Animal; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D019344:Lactic Acid / Q000032:analysis / Q000378:metabolism; D008279:Magnetic Resonance Imaging / Q000379:methods*; D008297:Male; D051379:Mice; D011471:Prostatic Neoplasms / Q000000981:diagnostic imaging / Q000378:metabolism; D019289:Pyruvic Acid / Q000032:analysis / Q000378:metabolism*
chemical_list: D002247:Carbon Isotopes; D019344:Lactic Acid; D019289:Pyruvic Acid