Shedding light on Aspergillus niger volatile exometabolome.
An in-depth exploration of the headspace content of Aspergillus niger cultures was performed upon different growth conditions, using a methodology based on advanced multidimensional gas chromatography. This volatile fraction comprises 428 putatively identified compounds distributed over several chemical families, being the major ones hydrocarbons, alcohols, esters, ketones and aldehydes. These metabolites may be related with different metabolic pathways, such as amino acid metabolism, biosynthesis and metabolism of fatty acids, degradation of aromatic compounds, mono and sesquiterpenoid synthesis and carotenoid cleavage. The A. niger molecular biomarkers pattern was established, comprising the 44 metabolites present in all studied conditions. This pattern was successfully used to distinguish A. niger from other fungi (Candida albicans and Penicillium chrysogenum) with 3 days of growth by using Partial Least Squares-Discriminant Analysis (PLS-DA). In addition, PLS-DA-Variable Importance in Projection was applied to highlight the metabolites playing major roles in fungi distinction; decreasing the initial dataset to only 16 metabolites. The data pre-processing time was substantially reduced, and an improvement of quality-of-fit value was achieved. This study goes a step further on A. niger metabolome construction and A. niger future detection may be proposed based on this molecular biomarkers pattern.
Department of Biology, University of Aveiro, Aveiro, Portugal.
Carina Pedrosa
CP
Costa
Department of Chemistry &QOPNA, University of Aveiro, Aveiro, Portugal.
Diogo
D
Gonçalves Silva
Department of Chemistry &CESAM, University of Aveiro, Aveiro, Portugal.
Alisa
A
Rudnitskaya
Department of Biology &CESAM, University of Aveiro, Aveiro, Portugal.
Adelaide
A
Almeida
Department of Chemistry &QOPNA, University of Aveiro, Aveiro, Portugal.
Sílvia M
SM
Rocha
D000596:Amino Acids / Q000378:metabolism; D001234:Aspergillus niger / Q000254:growth & development / Q000378:metabolism*; D015415:Biomarkers / Q000378:metabolism; D002338:Carotenoids / Q000378:metabolism; D016002:Discriminant Analysis; D005227:Fatty Acids / Q000378:metabolism; D008401:Gas Chromatography-Mass Spectrometry; D016018:Least-Squares Analysis; D055442:Metabolome; D012717:Sesquiterpenes / Q000378:metabolism; D014835:Volatilization
D000596:Amino Acids; D015415:Biomarkers; D005227:Fatty Acids; D012717:Sesquiterpenes; D002338:Carotenoids