Computing group cardinality constraint solutions for logistic regression problems.
We derive an algorithm to directly solve logistic regression based on cardinality constraint, group sparsity and use it to classify intra-subject MRI sequences (e.g. cine MRIs) of healthy from diseased subjects. Group cardinality constraint models are often applied to medical images in order to avoid overfitting of the classifier to the training data. Solutions within these models are generally determined by relaxing the cardinality constraint to a weighted feature selection scheme. However, these solutions relate to the original sparse problem only under specific assumptions, which generally do not hold for medical image applications. In addition, inferring clinical meaning from features weighted by a classifier is an ongoing topic of discussion. Avoiding weighing features, we propose to directly solve the group cardinality constraint logistic regression problem by generalizing the Penalty Decomposition method. To do so, we assume that an intra-subject series of images represents repeated samples of the same disease patterns. We model this assumption by combining series of measurements created by a feature across time into a single group. Our algorithm then derives a solution within that model by decoupling the minimization of the logistic regression function from enforcing the group sparsity constraint. The minimum to the smooth and convex logistic regression problem is determined via gradient descent while we derive a closed form solution for finding a sparse approximation of that minimum. We apply our method to cine MRI of 38 healthy controls and 44 adult patients that received reconstructive surgery of Tetralogy of Fallot (TOF) during infancy. Our method correctly identifies regions impacted by TOF and generally obtains statistically significant higher classification accuracy than alternative solutions to this model, i.e., ones relaxing group cardinality constraints.
Department of Psychiatry & Behavioral Sciences, Stanford University, Palo Alto, CA 94304, USA. Electronic address: michaelzhang917@gmail.com.
Yong
Y
Zhang
Department of Psychiatry & Behavioral Sciences, Stanford University, Palo Alto, CA 94304, USA; Center for Health Sciences, SRI International, Menlo Park, CA 94025, USA.
Dongjin
D
Kwon
Department of Psychiatry & Behavioral Sciences, Stanford University, Palo Alto, CA 94304, USA; Center for Health Sciences, SRI International, Menlo Park, CA 94025, USA.
Kilian M
KM
Pohl
D000328:Adult; D000465:Algorithms; D006801:Humans; D007223:Infant; D016015:Logistic Models; D019028:Magnetic Resonance Imaging, Cine / Q000379:methods*; D013771:Tetralogy of Fallot / Q000000981:diagnostic imaging / Q000601:surgery
Cine MRI; Classification; Group Sparsity; Logistic Regression