Multi-omics Frontiers in Algal Research: Techniques and Progress to Explore Biofuels in the Postgenomics World.
Current momentum of microalgal research rests extensively in tapping the potential of multi-omics methodologies in regard to sustainable biofuels. Microalgal biomass is fermented to bioethanol; while lipids, particularly triacylglycerides (TAGs), are transesterified to biodiesels. Biodiesel has emerged as an ideal biofuel candidate; hence, its commercialization and use are increasingly being emphasized. Abiotic stresses exaggerate TAG accumulation, but the precise mechanisms are yet to be known. More recently, comprehensive multi-omics studies in microalgae have emerged from the biofuel perspective. Genomics and transcriptomics of microalgae have provided crucial leads and basic understanding toward lipid biosynthesis. Proteomics and metabolomics are now complementing "algal omics" and offer precise functional insights into the attendant static and dynamic physiological contexts. Indeed, the field has progressed from shotgun to targeted approaches. Notably, targeted proteomics studies in microalga are not yet reported. Several multi-omics tools and technologies that may be used to dig deeper into the microalgal physiology are examined and highlighted in this review. The article therefore aims to both introduce various available high-throughput biotechnologies and applications of "omics" in microalgae, and enlists a compendium of the emerging cutting edge literature. We suggest that a strategic and thoughtful combination of data streams from different omics platforms can provide a system-wide overview. The algal omics warrants closer attention in the future, with a view to technical, economic, and societal impacts that are anticipated in the current postgenomics era.
1 Department of Biosciences and Bioengineering, Proteomics Laboratory, Indian Institute of Technology Bombay , Mumbai, India .
Vineeta
V
Rai
2 IITB-Monash Research Academy, Indian Institute of Technology Bombay , Mumbai, India .
Anbarasu
A
Karthikaichamy
3 Department of Biosciences and Bioengineering, Indian Institute of Technology , Guwahati, India .|4 DBT PAN IIT Centre for Bioenergy, Indian Institute of Technology , Bombay, Mumbai, India .
Debasish
D
Das
4 DBT PAN IIT Centre for Bioenergy, Indian Institute of Technology , Bombay, Mumbai, India .|5 Wadhwani Research Center for Bioengineering, Indian Institute of Technology Bombay , Mumbai, India .|6 Department of Chemical Engineering, Indian Institute of Technology Bombay , Mumbai, India .
Santosh
S
Noronha
4 DBT PAN IIT Centre for Bioenergy, Indian Institute of Technology , Bombay, Mumbai, India .|5 Wadhwani Research Center for Bioengineering, Indian Institute of Technology Bombay , Mumbai, India .|6 Department of Chemical Engineering, Indian Institute of Technology Bombay , Mumbai, India .
Pramod P
PP
Wangikar
1 Department of Biosciences and Bioengineering, Proteomics Laboratory, Indian Institute of Technology Bombay , Mumbai, India .|4 DBT PAN IIT Centre for Bioenergy, Indian Institute of Technology , Bombay, Mumbai, India .|5 Wadhwani Research Center for Bioengineering, Indian Institute of Technology Bombay , Mumbai, India .
Sanjeeva
S
Srivastava
D056804:Biofuels; D001709:Biotechnology / Q000379:methods*; D023281:Genomics; D055432:Metabolomics; D058086:Microalgae / Q000235:genetics / Q000378:metabolism*; D040901:Proteomics
D056804:Biofuels