Cavity residue leucine 95 and channel residues glutamine 204, aspartic acid 211, and phenylalanine 269 of toluene o-xylene monooxygenase influence catalysis.
Structural analysis of toluene-o-xylene monooxygenase (ToMO) hydroxylase revealed the presence of three hydrophobic cavities, a channel, and a pore leading from the protein surface to the active site. Here, saturation mutagenesis was used to investigate the catalytic roles of alpha-subunit (TouA) second cavity residue L95 and TouA channel residues Q204, D211, and F269. By testing the substrates toluene, phenol, nitrobenzene, and/or naphthalene, these positions were found to influence the catalytic activity of ToMO. Several regiospecific variants were identified from TouA positions Q204, F269, and L95. For example, TouA variant Q204H had the regiospecificity of nitrobenzene changed significantly from 30 to 61 % p-nitrophenol. Interestingly, a combination of mutations at Q204H and A106V altered the regiospecificity of nitrobenzene back to 27 % p-nitrophenol. TouA variants F269Y, F269P, Q204E, and L95D improved the meta-hydroxylating capability of nitrobenzene by producing 87, 85, 82, and 77 % m-nitrophenol, respectively. For naphthalene oxidation, TouA variants F269V, Q204A, Q204S/S222N, and F269T had the regiospecificity changed from 16 to 9, 10, 23, and 25 % 2-naphthol, respectively. Here, two additional TouA residues, S222 and A106, were also identified that may have important roles in catalysis. Most of the isolated variants from D211 remained active, whereas having a hydrophobic residue at this position appeared to diminish the catalytic activity toward naphthalene. The mutational effects on the ToMO regiospecificity described here suggest that it is possible to further fine tune and engineer the reactivity of multicomponent diiron monooxygenases toward different substrates at positions that are relatively distant from the active site.
Department of Genetics and Biongineering, Fatih University, Buyukcekmece, 34500, Istanbul, Turkey.
Cansu
C
Kurt
Department of Genetics and Biongineering, Fatih University, Buyukcekmece, 34500, Istanbul, Turkey.
Burcu
B
Sönmez
Department of Genetics and Biongineering, Fatih University, Buyukcekmece, 34500, Istanbul, Turkey.
Nurcan
N
Vardar
Department of Genetics and Biongineering, Fatih University, Buyukcekmece, 34500, Istanbul, Turkey.
K Cansu
KC
Yanık-Yıldırım
Department of Genetics and Biongineering, Fatih University, Buyukcekmece, 34500, Istanbul, Turkey. gschara@fatih.edu.tr.
Gönül
http://orcid.org/0000-0002-3740-1006
G
Vardar-Schara
D000595:Amino Acid Sequence; D019943:Amino Acid Substitution; D002384:Catalysis; D020134:Catalytic Domain; D016297:Mutagenesis, Site-Directed; D010105:Oxygenases / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism*; D021122:Protein Subunits / Q000737:chemistry; D011549:Pseudomonas / Q000201:enzymology
D021122:Protein Subunits; D010105:Oxygenases; C114360:toluene 2-xylene monooxygenase
Hydrophobic cavity; Regiospecificity; Saturation mutagenesis; Substrate channel; Toluene o-xylene monooxygenase