title: Conservation and tissue-specific transcription patterns of long noncoding RNAs.
abstract: Over the past decade, the focus of molecular biology has shifted from being predominately DNA and protein-centric to having a greater appreciation of RNA. It is now accepted that the genome is pervasively transcribed in tissue- and cell-specific manner, to produce not only protein-coding RNAs, but also an array of noncoding RNAs (ncRNAs). Many of these ncRNAs have been found to interact with DNA, protein and other RNA molecules where they exert regulatory functions. Long ncRNAs (lncRNAs) are a subclass of ncRNAs that are particularly interesting due to their cell-specific and species-specific expression patterns and unique conservation patterns. Currently, individual lncRNAs have been classified functionally; however, for the vast majority the functional relevance is unknown. To better categorize lncRNAs, an understanding of their specific expression patterns and evolutionary constraints are needed.
authors.affiliation: School of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
authors.forename: Melanie
authors.initials: M
authors.lastname: Ward
authors.affiliation: School of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
authors.forename: Callum
authors.initials: C
authors.lastname: McEwan
authors.affiliation: School of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
authors.forename: James D
authors.initials: JD
authors.lastname: Mills
authors.affiliation: School of Biotechnology and Biomolecular Sciences, University of New South Wales , Sydney, NSW 2052, Australia.
authors.forename: Michael
authors.initials: M
authors.lastname: Janitz
keywords: RNA-Seq; comparative genomics; gene regulation; lncRNAs; transcriptome