title: Transcriptomic analysis of KSHV-infected primary oral fibroblasts: The role of interferon-induced genes in the latency of oncogenic virus.
abstract: The Kaposi sarcoma-associated herpesvirus (KSHV) is the causative agent of Kaposi sarcoma (KS), the most common HIV/AIDS-associated tumor worldwide. Involvement of the oral cavity portends a poor prognosis for patients with KS, but the mechanisms for KSHV regulation of the oral tumor microenvironment are largely unknown. Infiltrating fibroblasts are found within KS lesions, and KSHV can establish latent infection within human primary fibroblasts in vitro and in vivo, but contributions for KSHV-infected fibroblasts to the KS microenvironment have not been previously characterized. In the present study, we used Illumina microarray to determine global gene expression changes in KSHV-infected primary human oral fibroblasts (PDLF and HGF). Among significantly altered candidates, we found that a series of interferon-induced genes were strongly up-regulated in these KSHV-infected oral cells. Interestingly, some of these genes in particular ISG15 and ISG20 are required for maintenance of virus latency through regulation of specific KSHV microRNAs. Our data indicate that oral fibroblasts may represent one important host cellular defense component against viral infection, as well as acting as a reservoir for herpesvirus lifelong infection in the oral cavity.
authors.affiliation: Department of Oncology, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.|Research Center for Translational Medicine and Key Laboratory of Arrhythmias, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.|Department of Medicine, Louisiana State University Health Sciences Center, Louisiana Cancer Research Center, New Orleans, LA, 70112, USA.
authors.forename: Lu
authors.initials: L
authors.lastname: Dai
authors.affiliation: Research Center for Translational Medicine and Key Laboratory of Arrhythmias, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.
authors.forename: Lihua
authors.initials: L
authors.lastname: Bai
authors.affiliation: Department of Pathology, Tulane University Health Sciences Center, Tulane Cancer Center, New Orleans, LA, 70112, USA.
authors.forename: Zhen
authors.initials: Z
authors.lastname: Lin
authors.affiliation: Department of Pediatrics, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.
authors.forename: Jing
authors.initials: J
authors.lastname: Qiao
authors.affiliation: Singapore Centre for Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, Singapore, 637551, Singapore.
authors.forename: Liang
authors.initials: L
authors.lastname: Yang
authors.affiliation: Department of Pathology, Tulane University Health Sciences Center, Tulane Cancer Center, New Orleans, LA, 70112, USA.
authors.forename: Erik K
authors.initials: EK
authors.lastname: Flemington
authors.affiliation: Department of Pediatrics, Louisiana State University Health Sciences Center, Louisiana Cancer Research Center, New Orleans, LA, 70112, USA.
authors.forename: Jovanny
authors.initials: J
authors.lastname: Zabaleta
authors.affiliation: Department of Oncology, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.|Research Center for Translational Medicine and Key Laboratory of Arrhythmias, East Hospital, Tongji University School of Medicine, Shanghai, 200120, China.|Department of Microbiology, Immunology and Parasitology, Louisiana State University Health Sciences Center, Louisiana Cancer Research Center, New Orleans, LA, 70112, USA.
authors.forename: Zhiqiang
authors.initials: Z
authors.lastname: Qin
mesh_terms: D045744:Cell Line, Tumor; D016207:Cytokines / Q000235:genetics / Q000378:metabolism; D005092:Exonucleases / Q000235:genetics / Q000378:metabolism; D005095:Exoribonucleases; D005347:Fibroblasts; D020869:Gene Expression Profiling; D015972:Gene Expression Regulation, Neoplastic; D019288:Herpesvirus 8, Human / Q000472:pathogenicity / Q000502:physiology*; D006801:Humans; D007372:Interferons / Q000378:metabolism; D035683:MicroRNAs / Q000378:metabolism; D009858:Oncogenic Viruses / Q000472:pathogenicity / Q000502:physiology*; D034622:RNA Interference; D034741:RNA, Small Interfering / Q000378:metabolism; D012367:RNA, Viral / Q000378:metabolism; D012514:Sarcoma, Kaposi / Q000235:genetics* / Q000821:virology; D059016:Tumor Microenvironment; D014452:Ubiquitins / Q000235:genetics / Q000378:metabolism; D015854:Up-Regulation; D017735:Virus Latency
chemical_list: D016207:Cytokines; D035683:MicroRNAs; D034741:RNA, Small Interfering; D012367:RNA, Viral; D014452:Ubiquitins; C074034:ISG15 protein, human; D007372:Interferons; D005092:Exonucleases; D005095:Exoribonucleases; C112346:ISG20 protein, human
keywords: KSHV; interferon; oral fibroblast; viral oncogenesis