title: Comparison of characterization and microbial communities in rice straw- and wheat straw-based compost for Agaricus bisporus production.
abstract: Rice straw (RS) is an important raw material for the preparation of Agaricus bisporus compost in China. In this study, the characterization of composting process from RS and wheat straw (WS) was compared for mushroom production. The results showed that the temperature in RS compost increased rapidly compared with WS compost, and the carbon (C)/nitrogen (N) ratio decreased quickly. The microbial changes during the Phase I and Phase II composting process were monitored using denaturing gradient gel electrophoresis (DGGE) and phospholipid fatty acid (PLFA) analysis. Bacteria were the dominant species during the process of composting and the bacterial community structure dramatically changed during heap composting according to the DGGE results. The bacterial community diversity of RS compost was abundant compared with WS compost at stages 4-5, but no distinct difference was observed after the controlled tunnel Phase II process. The total amount of PLFAs of RS compost, as an indicator of microbial biomass, was higher than that of WS. Clustering by DGGE and principal component analysis of the PLFA compositions revealed that there were differences in both the microbial population and community structure between RS- and WS-based composts. Our data indicated that composting of RS resulted in improved degradation and assimilation of breakdown products by A. bisporus, and suggested that the RS compost was effective for sustaining A. bisporus mushroom growth as well as conventional WS compost.
authors.affiliation: Nanjing Institute of Agricultural Sciences in Jiangsu Hilly Area, Nanjing, 210046, Jiangsu, China. wanglin0421nj@163.com.
authors.forename: Lin
authors.initials: L
authors.lastname: Wang
authors.affiliation: Nanjing Institute of Agricultural Sciences in Jiangsu Hilly Area, Nanjing, 210046, Jiangsu, China.
authors.forename: Jiugeng
authors.initials: J
authors.lastname: Mao
authors.affiliation: Nanjing Institute of Agricultural Sciences in Jiangsu Hilly Area, Nanjing, 210046, Jiangsu, China.
authors.forename: Hejuan
authors.initials: H
authors.lastname: Zhao
authors.affiliation: Weifang University of Science and Technology, Shouguang, 262700, Shandong, China.
authors.forename: Min
authors.initials: M
authors.lastname: Li
authors.affiliation: Nanjing Institute of Agricultural Sciences in Jiangsu Hilly Area, Nanjing, 210046, Jiangsu, China.
authors.forename: Qishun
authors.initials: Q
authors.lastname: Wei
authors.affiliation: Nanjing Institute of Agricultural Sciences in Jiangsu Hilly Area, Nanjing, 210046, Jiangsu, China.
authors.forename: Ying
authors.initials: Y
authors.lastname: Zhou
authors.affiliation: Nanjing Institute of Agricultural Sciences in Jiangsu Hilly Area, Nanjing, 210046, Jiangsu, China.
authors.forename: Heping
authors.initials: H
authors.lastname: Shao
mesh_terms: D000364:Agaricus / Q000254:growth & development*; D001419:Bacteria / Q000737:chemistry / Q000145:classification / Q000235:genetics / Q000302:isolation & purification; D002244:Carbon / Q000032:analysis; D058645:Denaturing Gradient Gel Electrophoresis; D005227:Fatty Acids / Q000032:analysis; D009584:Nitrogen / Q000032:analysis; D012275:Oryza; D010743:Phospholipids / Q000737:chemistry; D012987:Soil / Q000737:chemistry; D012988:Soil Microbiology; D013696:Temperature; D014908:Triticum
chemical_list: D005227:Fatty Acids; D010743:Phospholipids; D012987:Soil; D002244:Carbon; D009584:Nitrogen
keywords: Agaricus bisporus; Composting; DGGE; PLFA; Rice straw