title: Comparison of the homogeneity of mRNAs encoding SFRP5, FZD4, and Fosl1 in post-injury intervals: Subcellular localization of markers may influence wound age estimation.
abstract: The inter-group heterogeneity and intra-group homogeneity of relative expression are very necessary when the mRNA were used to determine wound age accurately in forensic medicine. The aim of this study was to assess the intra-group homogeneity of SFRP5, FZD4 and Fosl1 mRNAs in post-injury intervals. The corresponding proteins show different subcellular locations. A total of 78 Sprague-Dawley rats were divided into control and contusion groups. At 4, 8, 12, 16, 20, 24, 28, 32, 36, 40, 44, or 48 h (n = 6 per group) after contusion (under anesthesia by chloral hydrate intraperitoneally), the rats were sacrificed using a lethal dose of pentobarbital, and samples of the injured muscles were collected. The raw Ct values of SFRP5, FZD4, and Fosl1 mRNAs were obtained using real-time PCR. After normalized to RPL13 mRNA levels, the coefficient of variation (CV) and the relative average deviation (d%) of each normalized Ct, and their relative expression levels, were calculated in each post-injury interval. Two methods were applied to compare the homogeneity of the three genes. First, each gene was given a score based on its CV value in each post-injury interval. Then, the sum of the 13 scores was calculated; a low sum indicated high homogeneity. Second, the 13 calculated CVs or d%s were used as raw data, which was described as the mean ± SD. Based on this mean ± SD, a CV of the CVs and a d% of the d%s were calculated to represent the variation; a low value indicated high homogeneity. The sum of the variability of FZD4 mRNA was lower than those of the SFRP5 and Fosl1 mRNAs, consistent with the results that the FZD4 mRNA had the lowest mean, the smallest CV of all CVs, and the smallest d% of all d%s, among the three genes. In conclusion, these data indicated that mRNA encoding membranous FZD4 was likely to be more homogeneous than those encoding SFRP5 and Fosl1 within post-injury intervals.
authors: Department of Forensic Pathology, Shanxi Medical University, Taiyuan, China.
authors: Xi-Yan
authors: XY
authors: Zhu
authors: Department of Forensic Pathology, Shanxi Medical University, Taiyuan, China.
authors: Qiu-Xiang
authors: QX
authors: Du
authors: Department of Forensic Pathology, Shanxi Medical University, Taiyuan, China.
authors: San-Qiang
authors: SQ
authors: Li
authors: Department of Forensic Pathology, Shanxi Medical University, Taiyuan, China. Electronic address: junhong.sun@sxmu.edu.cn.
authors: Jun-Hong
authors: JH
authors: Sun
mesh_terms: D054392:Adipokines / Q000235:genetics* / Q000378:metabolism; D000818:Animals; D015415:Biomarkers / Q000378:metabolism; D003288:Contusions / Q000378:metabolism* / Q000473:pathology; D049429:Forensic Pathology; D051157:Frizzled Receptors / Q000235:genetics* / Q000378:metabolism; D016760:Proto-Oncogene Proteins c-fos / Q000235:genetics* / Q000378:metabolism; D012333:RNA, Messenger / Q000378:metabolism*; D017207:Rats, Sprague-Dawley; D060888:Real-Time Polymerase Chain Reaction; D013997:Time Factors; D014945:Wound Healing / Q000502:physiology*; D000099169:Fos-Related Antigen 1; D000094742:Secreted Frizzled-Related Proteins
chemical_list: D054392:Adipokines; D015415:Biomarkers; D051157:Frizzled Receptors; D016760:Proto-Oncogene Proteins c-fos; D012333:RNA, Messenger; D000099169:Fos-Related Antigen 1; C498582:Fzd4 protein, rat; C000608752:sFRP5 protein, rat; D000094742:Secreted Frizzled-Related Proteins
keywords: Intra-group homogeneity; Marker; Real-time PCR; Subcellular location; Wound age estimation