title: WebSTAR3D: a web server for RNA 3D structural alignment.
abstract: The WebSTAR3D web server is a user-friendly online interface for the alignment of RNA 3D structures. The website takes as input two files, each of which can be in either PDB or mmCIF format, containing the desired structures to align, via a PDB code or user upload. In return, the user is presented with a visualization of the aligned structures in Jmol or JSmol, along with the corresponding sequence alignment, and the option to download the nucleotide mapping of the structures and a PDB file containing the aligned, superimposed structures.
  
  
  
  The WebSTAR3D is available at http://rna.ucf.edu/WebSTAR3D CONTACT: shzhang@cs.ucf.edu.
authors: Department of Computer Science, University of Central Florida, Orlando, FL 32816, USA.
authors: Erwin
authors: E
authors: Holzhauser
authors: Department of Computer Science, University of Central Florida, Orlando, FL 32816, USA.
authors: Ping
authors: P
authors: Ge
authors: Department of Computer Science, University of Central Florida, Orlando, FL 32816, USA.
authors: Shaojie
authors: S
authors: Zhang
mesh_terms: D020407:Internet; D009690:Nucleic Acid Conformation; D012313:RNA / Q000737:chemistry*; D016415:Sequence Alignment; D012984:Software; D014584:User-Computer Interface
chemical_list: D012313:RNA