title: Evaluation of Hologic Aptima HIV-1 Quant Dx Assay on the Panther System on HIV Subtypes.
abstract: Quantitation of the HIV-1 viral load in plasma is the current standard of care for clinical monitoring of HIV-infected individuals undergoing antiretroviral therapy. This study evaluated the analytical and clinical performances of the Aptima HIV-1 Quant Dx assay (Hologic, San Diego, CA) for monitoring viral load by using 277 well-characterized subtype samples, including 171 cultured virus isolates and 106 plasma samples from 35 countries, representing all major HIV subtypes, recombinants, and circulating recombinant forms (CRFs) currently in circulation worldwide. Linearity of the Aptima assay was tested on each of 6 major HIV-1 subtypes (A, B, C, D, CRF01_AE, and CRF02_AG) and demonstrated an R(2) value of ≥0.996. The performance of the Aptima assay was also compared to those of the Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 v.2 (CAP/CTM) and Abbott m2000 RealTime HIV-1 (RealTime) assays on all subtype samples. The Aptima assay values averaged 0.21 log higher than the CAP/CTM values and 0.30 log higher than the RealTime values, and the values were >0.4 log higher than CAP/CTM values for subtypes F and G and than RealTime values for subtypes C, F, and G and CRF02_AG. Two samples demonstrated results with >1-log differences from RealTime results. When the data were adjusted by the average difference, 94.9% and 87.0% of Aptima results fell within 0.5 log of the CAP/CTM and RealTime results, respectively. The linearity and accuracy of the Aptima assay in correctly quantitating all major HIV-1 subtypes, coupled with the completely automated format and high throughput of the Panther system, make this system well suited for reliable measurement of viral load in the clinical laboratory.
authors: U.S. Military HIV Research Program (MHRP), Henry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, Maryland, USA mmanak@hivresearch.org.
authors: Mark M
authors: 0000-0002-9217-9129
authors: MM
authors: Manak
authors: U.S. Military HIV Research Program (MHRP), Henry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, Maryland, USA.
authors: Holly R
authors: HR
authors: Hack
authors: Hologic, Inc., San Diego, California, USA.
authors: Sangeetha V
authors: SV
authors: Nair
authors: Hologic, Inc., San Diego, California, USA.
authors: Andrew
authors: A
authors: Worlock
authors: MHRP, Walter Reed Army Institute of Research (WRAIR), Silver Spring, Maryland, USA.
authors: Jennifer A
authors: JA
authors: Malia
authors: MHRP, Walter Reed Army Institute of Research (WRAIR), Silver Spring, Maryland, USA.
authors: Sheila A
authors: SA
authors: Peel
authors: MHRP, Walter Reed Army Institute of Research (WRAIR), Silver Spring, Maryland, USA.
authors: Linda L
authors: LL
authors: Jagodzinski
mesh_terms: D005838:Genotype; D006678:HIV / Q000145:classification / Q000235:genetics / Q000302:isolation & purification*; D015658:HIV Infections / Q000821:virology*; D006801:Humans; D025202:Molecular Diagnostic Techniques / Q000379:methods; D019562:Viral Load / Q000379:methods*