title: Identifying Regions Enriched in a ChIP-seq Data Set (Peak Finding).
abstract: This protocol demonstrates how to use MACS software to call peaks in a ChIP-seq data set. MACS is one of the most widely used peak-calling programs. The protocol describes how to run MACS in a UNIX environment and on Galaxy and how to extract the sequences of ±50 bp around the summits of the 500 MACS peaks with the most significant P values.
authors: Jui-Hung
authors: JH
authors: Hung
authors: Zhiping
authors: Z
authors: Weng
mesh_terms: D019295:Computational Biology / Q000379:methods*; D020869:Gene Expression Profiling / Q000379:methods*; D012984:Software