title: Generation of 3D Collagen Gels with Controlled Diverse Architectures.
abstract: Rat tail collagen solutions have been used as polymerizable in vitro three dimensional (3D) extracellular matrix (ECM) gels for single and collective cell migration assays as well as spheroid formation. Factors such as ECM concentration, pH, ionic concentration, and temperature can alter collagen polymerization and ECM architecture. This unit describes how to generate 3D collagen gels that have distinct architectures ranging from a highly reticular meshwork of short thin fibrils with small pores to a loose matrix consisting of stiff, parallel-bundled long fibrils by changing collagen polymerization temperature. This permits analysis of 3D cell migration in different ECM architectures found in vivo while maintaining a similar ECM concentration. Also included are collagen labeling techniques helpful for ECM visualization during live fluorescence imaging. © 2016 by John Wiley & Sons, Inc.
authors: National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda Maryland.
authors: Andrew D
authors: AD
authors: Doyle
mesh_terms: D000818:Animals; D001671:Biochemistry / Q000379:methods*; D018929:Cell Culture Techniques; D002470:Cell Survival; D011232:Chemical Precipitation; D003094:Collagen / Q000737:chemistry*; D004396:Coloring Agents / Q000737:chemistry; D005109:Extracellular Matrix / Q000378:metabolism; D005456:Fluorescent Dyes / Q000737:chemistry; D005782:Gels / Q000737:chemistry*; D021621:Imaging, Three-Dimensional; D058105:Polymerization; D051381:Rats; D012965:Sodium Chloride / Q000737:chemistry; D012996:Solutions; D013388:Succinimides / Q000737:chemistry; D013623:Tail; D013696:Temperature
chemical_list: D004396:Coloring Agents; D005456:Fluorescent Dyes; D005782:Gels; D012996:Solutions; D013388:Succinimides; D012965:Sodium Chloride; D003094:Collagen; C001426:N-hydroxysuccinimide
keywords: 3D matrix; ECM architecture; fluorescent labelling; rat-tail collagen