Snapshots of a shrinking partner: Genome reduction in Serratia symbiotica.
Genome reduction is pervasive among maternally-inherited endosymbiotic organisms, from bacteriocyte- to gut-associated ones. This genome erosion is a step-wise process in which once free-living organisms evolve to become obligate associates, thereby losing non-essential or redundant genes/functions. Serratia symbiotica (Gammaproteobacteria), a secondary endosymbiont present in many aphids (Hemiptera: Aphididae), displays various characteristics that make it a good model organism for studying genome reduction. While some strains are of facultative nature, others have established co-obligate associations with their respective aphid host and its primary endosymbiont (Buchnera). Furthermore, the different strains hold genomes of contrasting sizes and features, and have strikingly disparate cell shapes, sizes, and tissue tropism. Finally, genomes from closely related free-living Serratia marcescens are also available. In this study, we describe in detail the genome reduction process (from free-living to reduced obligate endosymbiont) undergone by S. symbiotica, and relate it to the stages of integration to the symbiotic system the different strains find themselves in. We establish that the genome reduction patterns observed in S. symbiotica follow those from other dwindling genomes, thus proving to be a good model for the study of the genome reduction process within a single bacterial taxon evolving in a similar biological niche (aphid-Buchnera).
Institut Cavanilles de Biodiversitat I Biologia Evolutiva - Universitat de València, Genética Evolutiva, Paterna, 46980, Spain.
Alejandro
A
Manzano-Marín
Institut Cavanilles de Biodiversitat I Biologia Evolutiva - Universitat de València, Genética Evolutiva, Paterna, 46980, Spain.|Fundación para el Fomento de la Investigación Sanitaria y Biomédica de la Communitat Valenciana (FISABIO), Genómica y Salud, València, 46020, Spain.
Amparo
A
Latorre
D000596:Amino Acids / Q000096:biosynthesis; D053898:Biosynthetic Pathways / Q000235:genetics; D016000:Cluster Analysis; D015964:Gene Expression Regulation, Bacterial; D015321:Gene Rearrangement; D005798:Genes, Bacterial; D016680:Genome, Bacterial; D020871:RNA Stability / Q000235:genetics; D012329:RNA, Bacterial / Q000235:genetics; D012343:RNA, Transfer / Q000235:genetics; D012705:Serratia / Q000235:genetics*
D000596:Amino Acids; D012329:RNA, Bacterial; D012343:RNA, Transfer