title: Meis/UNC-62 isoform dependent regulation of CoupTF-II/UNC-55 and GABAergic motor neuron subtype differentiation.
abstract: Gene regulatory networks orchestrate the assembly of functionally related cells within a cellular network. Subtle differences often exist among functionally related cells within such networks. How differences are created among cells with similar functions has been difficult to determine due to the complexity of both the gene and the cellular networks. In Caenorhabditis elegans, the DD and VD motor neurons compose a cross-inhibitory, GABAergic network that coordinates dorsal and ventral muscle contractions during locomotion. The Pitx2 homologue, UNC-30, acts as a terminal selector gene to create similarities and the Coup-TFII homologue, UNC-55, is necessary for creating differences between the two motor neuron classes. What is the organizing gene regulatory network responsible for initiating the expression of UNC-55 and thus creating differences between the DD and VD motor neurons? We show that the unc-55 promoter has modules that contain Meis/UNC-62 binding sites. These sites can be subdivided into regions that are capable of activating or repressing UNC-55 expression in different motor neurons. Interestingly, different isoforms of UNC-62 are responsible for the activation and the stabilization of unc-55 transcription. Furthermore, specific isoforms of UNC-62 are required for proper synaptic patterning of the VD motor neurons. Isoform specific regulation of differentiating neurons is a relatively unexplored area of research and presents a mechanism for creating differences among functionally related cells within a network.
authors.affiliation: Department of Biology, Georgia State University, Atlanta, GA 30303, United States.
authors.forename: Richard F
authors.initials: RF
authors.lastname: Campbell
authors.affiliation: Department of Biology, Georgia State University, Atlanta, GA 30303, United States. Electronic address: wwalthall@gsu.edu.
authors.forename: Walter W
authors.initials: WW
authors.lastname: Walthall
mesh_terms: D000818:Animals; D030801:Animals, Genetically Modified; D064113:CRISPR-Cas Systems; D017173:Caenorhabditis elegans / Q000235:genetics* / Q000502:physiology; D029742:Caenorhabditis elegans Proteins / Q000096:biosynthesis / Q000502:physiology*; D059330:GABAergic Neurons / Q000166:cytology*; D018507:Gene Expression Regulation, Developmental; D053263:Gene Regulatory Networks / Q000235:genetics; D017930:Genes, Reporter; D018398:Homeodomain Proteins / Q000502:physiology*; D009046:Motor Neurons / Q000145:classification / Q000166:cytology*; D055495:Neurogenesis / Q000235:genetics; D011401:Promoter Regions, Genetic / Q000235:genetics; D020033:Protein Isoforms / Q000502:physiology; D018510:RNA, Helminth / Q000096:biosynthesis / Q000235:genetics; D012333:RNA, Messenger / Q000096:biosynthesis / Q000235:genetics; D011956:Receptors, Cell Surface / Q000096:biosynthesis / Q000502:physiology*; D018160:Receptors, Cytoplasmic and Nuclear / Q000096:biosynthesis / Q000502:physiology*; D011993:Recombinant Fusion Proteins / Q000235:genetics / Q000378:metabolism; D014157:Transcription Factors; D014158:Transcription, Genetic / Q000235:genetics; D000094704:RNA, Guide, CRISPR-Cas Systems
chemical_list: D029742:Caenorhabditis elegans Proteins; D018398:Homeodomain Proteins; D020033:Protein Isoforms; D018510:RNA, Helminth; D012333:RNA, Messenger; D011956:Receptors, Cell Surface; D018160:Receptors, Cytoplasmic and Nuclear; D011993:Recombinant Fusion Proteins; D014157:Transcription Factors; D000094704:RNA, Guide, CRISPR-Cas Systems; C117323:UNC-55 protein, C elegans; C109537:Unc-62 protein, C elegans
keywords: Gene regulatory networks; Isoform specific regulation; Motor neurons; Subtype determining transcription factors