Butyricimonas phoceensis sp. nov., a new anaerobic species isolated from the human gut microbiota of a French morbidly obese patient.
Butyricimonas phoceensis strain AT9 (= CSUR 1981 = DSM 100664) was isolated from a stool sample from a morbidly obese French patient living in Marseille using the culturomics approach. The genome of this Gram-negative-staining, anaerobic and non-spore forming rod bacillus is 4 736 949 bp long and contains 3947 protein-coding genes. Genomic analysis identified 173 genes as ORFans (4.5%) and 1650 orthologous proteins (42%) not shared with the closest phylogenetic species, Butyricimonas virosa. Its major fatty acid was the branched acid iso-C15:0 (62.3%).
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
A H
AH
Togo
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
A
A
Diop
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
G
G
Dubourg
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
T T
TT
Nguyen
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
C
C
Andrieu
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
A
A
Caputo
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
C
C
Couderc
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
P-E
PE
Fournier
Aix Marseille Université, NORT "Nutrition, Obesity and Risk of Thrombosis", INSERM1062, INRA1260, F-13385 Marseille, France; APHM, CHU Hôpital de la Conception, Service Nutrition, Maladies Métaboliques et Endocrinologie, F-13385 Marseille, France.
M
M
Maraninchi
Aix Marseille Université, NORT "Nutrition, Obesity and Risk of Thrombosis", INSERM1062, INRA1260, F-13385 Marseille, France; APHM, CHU Hôpital de la Conception, Service Nutrition, Maladies Métaboliques et Endocrinologie, F-13385 Marseille, France.
R
R
Valero
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France; Special Infectious Agents Unit, King Fahd Medical Research Center, King Abdulaziz University, Jeddah, Saudi Arabia.
D
D
Raoult
Aix Marseille Université, URMITE, Institut Hospitalier Universitaire Méditerranée-Infection, UM63, CNRS7278, IRD198, INSERM1095, France.
M
M
Million
Butyrate; Butyricimonas phoceensissp. nov.; culturomics; genome; obesity; taxonogenomics
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