Organic acid mediated repression of sugar utilization in rhizobia.
Rhizobia are a class of symbiotic diazotrophic bacteria which utilize C4 acids in preference to sugars and the sugar utilization is repressed as long as C4 acids are present. This can be manifested as a diauxie when rhizobia are grown in the presence of a sugar and a C4 acid together. Succinate, a C4 acid is known to repress utilization of sugars, sugar alcohols, hydrocarbons, etc by a mechanism termed as Succinate Mediated Catabolite Repression (SMCR). Mechanism of catabolite repression determines the hierarchy of carbon source utilization in bacteria. Though the mechanism of catabolite repression has been well studied in model organisms like E. coli, B. subtilis and Pseudomonas sp., mechanism of SMCR in rhizobia has not been well elucidated. C4 acid uptake is important for effective symbioses while mutation in the sugar transport and utilization genes does not affect symbioses. Deletion of hpr and sma0113 resulted in the partial relief of SMCR of utilization of galactosides like lactose, raffinose and maltose in the presence of succinate. However, no such regulators governing SMCR of glucoside utilization have been identified till date. Though rhizobia can utilize multitude of sugars, high affinity transporters for many sugars are yet to be identified. Identifying high affinity sugar transporters and studying the mechanism of catabolite repression in rhizobia is important to understand the level of regulation of SMCR and the key regulators involved in SMCR.
Institute of Science, Nirma University, Ahmedabad, Gujarat, India.
Bhagya
B
Iyer
Institute of Science, Nirma University, Ahmedabad, Gujarat, India.
Mahendrapal Singh
MS
Rajput
Institute of Science, Nirma University, Ahmedabad, Gujarat, India; Environmental Molecular Biology Laboratory, Division of Biosphere, Faculty of Environmental Earth Science, Hokkaido University, Sapporo, Hokkaido, Japan.
Rahul
R
Jog
Institute of Science, Nirma University, Ahmedabad, Gujarat, India.
Ekta
E
Joshi
Institute of Science, Nirma University, Ahmedabad, Gujarat, India.
Krishna
K
Bharwad
Institute of Science, Nirma University, Ahmedabad, Gujarat, India. Electronic address: shalini.rjk@nirmauni.ac.in.
Shalini
S
Rajkumar
D000143:Acids / Q000378:metabolism*; D001426:Bacterial Proteins / Q000235:genetics / Q000378:metabolism; D001692:Biological Transport; D050260:Carbohydrate Metabolism; D015964:Gene Expression Regulation, Bacterial; D053858:Metabolic Networks and Pathways; D009154:Mutation; D009930:Organic Chemicals / Q000378:metabolism*; D012231:Rhizobium / Q000235:genetics / Q000378:metabolism*; D013559:Symbiosis
D000143:Acids; D001426:Bacterial Proteins; D009930:Organic Chemicals
Catabolite repression; Rhizobia; SMCR; Succinate