Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7.
We and others have shown the utility of long sequence reads to improve genome assembly quality. In this study, we generated PacBio DNA sequence data to improve the assemblies of draft genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7.
Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, Tennessee, USA.
Sagar M
SM
Utturkar
Department of Biological Chemistry, The Weizmann Institute of Science, Rehovot, Israel.
Edward A
EA
Bayer
Department of Molecular Microbiology and Biotechnology, Tel-Aviv University, Ramat Aviv, Israel.
Ilya
I
Borovok
Department of Molecular Microbiology and Biotechnology, Tel-Aviv University, Ramat Aviv, Israel.
Raphael
R
Lamed
Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Richard A
RA
Hurt
Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Miriam L
ML
Land
Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA BioEnergy Science Center, Oak Ridge, Tennessee, USA.
Dawn M
DM
Klingeman
Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Dwayne
http://orcid.org/0000-0002-4469-6391
D
Elias
Institute for Environmental Genomics, University of Oklahoma, Norman, Oklahoma, USA.
Jizhong
J
Zhou
DOE Joint Genome Institute, Walnut Creek, California, USA.
Marcel
M
Huntemann
DOE Joint Genome Institute, Walnut Creek, California, USA.
Alicia
A
Clum
DOE Joint Genome Institute, Walnut Creek, California, USA.
Manoj
M
Pillay
DOE Joint Genome Institute, Walnut Creek, California, USA.
Krishnaveni
K
Palaniappan
DOE Joint Genome Institute, Walnut Creek, California, USA.
Neha
N
Varghese
DOE Joint Genome Institute, Walnut Creek, California, USA.
Natalia
N
Mikhailova
DOE Joint Genome Institute, Walnut Creek, California, USA.
Dimitrios
D
Stamatis
DOE Joint Genome Institute, Walnut Creek, California, USA.
T B K
TB
Reddy
DOE Joint Genome Institute, Walnut Creek, California, USA.
Chew Yee
CY
Ngan
DOE Joint Genome Institute, Walnut Creek, California, USA.
Chris
C
Daum
DOE Joint Genome Institute, Walnut Creek, California, USA.
Nicole
N
Shapiro
DOE Joint Genome Institute, Walnut Creek, California, USA.
Victor
V
Markowitz
DOE Joint Genome Institute, Walnut Creek, California, USA.
Natalia
N
Ivanova
DOE Joint Genome Institute, Walnut Creek, California, USA.
Nikos
N
Kyrpides
DOE Joint Genome Institute, Walnut Creek, California, USA.
Tanja
T
Woyke
Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, Tennessee, USA Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA BioEnergy Science Center, Oak Ridge, Tennessee, USA brownsd@ornl.gov.
Steven D
SD
Brown
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