title: Dataset of TWIST1-regulated genes in the cranial mesoderm and a transcriptome comparison of cranial mesoderm and cranial neural crest.
abstract: This article contains data related to the research article entitled "Transcriptional targets of TWIST1 in the cranial mesoderm regulate cell-matrix interactions and mesenchyme maintenance" by Bildsoe et al. (2016) [1]. The data presented here are derived from: (1) a microarray-based comparison of sorted cranial mesoderm (CM) and cranial neural crest (CNC) cells from E9.5 mouse embryos; (2) comparisons of transcription profiles of head tissues from mouse embryos with a CM-specific loss-of-function ofTwist1and control mouse embryos collected at E8.5 and E9.5; (3) ChIP-seq using a TWIST1-specific monoclonal antibody with chromatin extracts from TWIST1-expressing MDCK cells, a model for a TWIST1-dependent mesenchymal state.
authors.affiliation: Embryology Unit, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia.
authors.forename: Heidi
authors.initials: H
authors.lastname: Bildsoe
authors.affiliation: Embryology Unit, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia.
authors.forename: Xiaochen
authors.initials: X
authors.lastname: Fan
authors.affiliation: Bioinformatics Group, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia.
authors.forename: Emilie E
authors.initials: EE
authors.lastname: Wilkie
authors.affiliation: Embryology Unit, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia; Biomedical Sciences, Faculty of Mathematics and Natural Sciences, University of Groningen, The Netherlands.
authors.forename: Ator
authors.initials: A
authors.lastname: Ashoti
authors.affiliation: Embryology Unit, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia.
authors.forename: Vanessa J
authors.initials: VJ
authors.lastname: Jones
authors.affiliation: Embryology Unit, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia.
authors.forename: Melinda
authors.initials: M
authors.lastname: Power
authors.affiliation: Centre for Genomic Sciences, Department of Biochemistry, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong SAR, China.
authors.forename: Jing
authors.initials: J
authors.lastname: Qin
authors.affiliation: Centre for Genomic Sciences, Department of Biochemistry, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong SAR, China.
authors.forename: Junwen
authors.initials: J
authors.lastname: Wang
authors.affiliation: Embryology Unit, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia.
authors.forename: Patrick P L
authors.initials: PP
authors.lastname: Tam
authors.affiliation: Embryology Unit, Children's Medical Research Institute, Sydney Medical School, University of Sydney, Westmead, NSW 2145, Australia.
authors.forename: David A F
authors.initials: DA
authors.lastname: Loebel