title: Phylogenetic Position of Parasitic Chytrids on Diatoms: Characterization of a Novel Clade in Chytridiomycota.
abstract: Chytrids are true fungi that reproduce with posteriorly uniflagellate zoospores. In the last decade, environmental DNA surveys revealed a large number of uncultured chytrids as well as undescribed order-level novel clades in Chytridiomycota. Although many species have been morphologically described, only some DNA sequence data of parasitic chytrids are available from the database. We herein discuss five cultures of parasitic chytrids on diatoms Aulacoseira spp. and Asterionella formosa. In order to identify the chytrids examined, thallus morphologies were observed using light microscopy. We also conducted a phylogenetic analysis using 18S, 5.8S, and 28S rDNA sequences to obtain their phylogenetic positions. Based on their morphological characteristics, two cultures parasitic on As. formosa were identified as Rhizophydium planktonicum and Zygorhizidium planktonicum. The other three cultures infecting Aulacoseira spp. (two on Aulacoseira ambigua and the other on Aulacoseira granulata) were regarded as Zygorhizidium aff. melosirae. The results of the molecular phylogenetic analysis revealed that R. planktonicum belonged to the known order Chytridiales, while the two species of Zygorhizidium were placed in a novel clade that was previously reported as an undescribed clade composed of only the environmental sequences of uncultured chytrids.
authors.affiliation: Sugadaira Montane Research Center, University of Tsukuba, 1278-294, Sugadaira-Kogen, Ueda, Nagano, 386-2204, Japan.
authors.forename: Kensuke
authors.initials: K
authors.lastname: Seto
authors.affiliation: Faculty of Science, Toho University, 2-2-1, Miyama, Funabashi, Chiba, 274-8510, Japan.
authors.forename: Maiko
authors.initials: M
authors.lastname: Kagami
authors.affiliation: Sugadaira Montane Research Center, University of Tsukuba, 1278-294, Sugadaira-Kogen, Ueda, Nagano, 386-2204, Japan.
authors.forename: Yousuke
authors.initials: Y
authors.lastname: Degawa
mesh_terms: D001483:Base Sequence; D008411:Chytridiomycota / Q000145:classification* / Q000166:cytology / Q000235:genetics / Q000302:isolation & purification*; D002965:Classification; D004271:DNA, Fungal / Q000235:genetics / Q000302:isolation & purification; D004275:DNA, Ribosomal / Q000235:genetics; D017377:Diatoms / Q000469:parasitology*; D005658:Fungi / Q000145:classification* / Q000166:cytology / Q000235:genetics / Q000302:isolation & purification*; D007564:Japan; D008853:Microscopy; D010802:Phylogeny; D012339:RNA, Ribosomal, 28S / Q000235:genetics; D012340:RNA, Ribosomal, 5.8S / Q000235:genetics; D013045:Species Specificity; D013624:Taiwan
chemical_list: D004271:DNA, Fungal; D004275:DNA, Ribosomal; D012339:RNA, Ribosomal, 28S; D012340:RNA, Ribosomal, 5.8S
keywords: 
  Rhizophydium planktonicum
  ; 
  Zygorhizidium
  ; 
  Zygorhizidium melosirae
  ; 
  Zygorhizidium planktonicum
  ; Chytridiomycetes