title: Developing adaptive QM/MM computer simulations for electrochemistry.
abstract: We report the development of adaptive QM/MM computer simulations for electrochemistry, providing public access to all sources via the free and open source software development model. We present a modular workflow-based MD simulation code as a platform for algorithms for partitioning space into different regions, which can be treated at different levels of theory on a per-timestep basis. Currently implemented algorithms focus on targeting molecules and their solvation layers relevant to electrochemistry. Instead of using built-in forcefields and quantum mechanical methods, the code features a universal interface, which allows for extension to a range of external forcefield programs and programs for quantum mechanical calculations, thus enabling the user to readily implement interfaces to those programs. The purpose of this article is to describe our codes and illustrate its usage. © 2016 Wiley Periodicals, Inc.
authors: Institute for Theoretical Chemistry, Ulm University, Albert-Einstein-Allee 11, Ulm, 89069, Germany.
authors: Sebastian
authors: S
authors: Dohm
authors: Institute for Theoretical Chemistry, University Duisburg-Essen, Universitätsstr. 5, Essen, 45117, German.
authors: Eckhard
authors: E
authors: Spohr
authors: Institute for Theoretical Chemistry, Ulm University, Albert-Einstein-Allee 11, Ulm, 89069, Germany.
authors: Martin
authors: M
authors: Korth
keywords: adaptive QM/MM; electrochemistry; moving quantum region