title: How to transform a recalcitrant Paenibacillus strain: From culture medium to restriction barrier.
abstract: Paenibacillus riograndensis SBR5Tis a plant growth-promoting bacterium isolated from the wheat rhizosphere. Its recalcitrance to genetic manipulation is a major bottleneck for molecular studies, as has been reported for other Paenibacillus environmental isolates. An efficient electroporation protocol was established by evaluating diverse parameters and optimizing the culture medium, culture growth phase, electroporation solution, recovery medium, DNA input, and electric field strength. Efficiencies of approximately 2.8×104transformantsμg-1of plasmid DNA were obtained. The optimized protocol was tested with other Paenibacillus species, and the relevance of bypassing the restriction DNA defense system to transform Paenibacillus was highlighted. This protocol is the tool needed to deepen molecular studies with this strain and will aid in the manipulation of other new environmental isolates that also exhibit recalcitrant transformation difficulties.
authors: Laboratório de Microbiologia Agrícola, Departamento de Genética, Instituto de Biociências (IB), Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil.
authors: Evelise
authors: E
authors: Bach
authors: Laboratório de Microbiologia Agrícola, Departamento de Genética, Instituto de Biociências (IB), Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil.
authors: Gabriela
authors: G
authors: de Carvalho Fernandes
authors: Laboratório de Microbiologia Agrícola, Departamento de Genética, Instituto de Biociências (IB), Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil. Electronic address: luciane.passaglia@ufrgs.br.
authors: Luciane Maria Pereira
authors: LMP
authors: Passaglia
mesh_terms: D003470:Culture Media / Q000737:chemistry*; D004271:DNA, Fungal; D018274:Electroporation / Q000379:methods*; D004926:Escherichia coli / Q000235:genetics; D015870:Gene Expression; D018014:Gene Transfer Techniques; D056507:Paenibacillus / Q000235:genetics*; D010957:Plasmids / Q000235:genetics; D058441:Rhizosphere; D014170:Transformation, Genetic; D014908:Triticum / Q000382:microbiology
chemical_list: D003470:Culture Media; D004271:DNA, Fungal
keywords: DNA restriction; Electroporation; Gram-positive; R-M system; Transformation