microRNA Target Prediction.
microRNAs are short RNAs that reduce gene expression by binding to their targets. Computational predictions indicate that all human genes may be regulated by microRNAs, with each microRNA possibly targeting thousands of genes. Commonly used software will produce a prohibitive number of predicted targets for each microRNA. Here I describe procedures that refine these predictions by integrating available software and expression data from experiments available online. These procedures are tailored to experiments where predicting true targets is more important than detecting all putative targets.
CNRS, UMR 5203, Montpellier, 34094, France. W.Ritchie@centenary.org.au.
William
W
Ritchie
D020413:3' Untranslated Regions; D000465:Algorithms; D000818:Animals; D020029:Base Pairing; D001483:Base Sequence; D001665:Binding Sites; D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D005786:Gene Expression Regulation; D006801:Humans; D035683:MicroRNAs / Q000235:genetics* / Q000378:metabolism; D012045:Regulatory Sequences, Nucleic Acid; D012984:Software
D020413:3' Untranslated Regions; D035683:MicroRNAs
Target genes; microRNA; microRNA expression