title: transPLANT Resources for Triticeae Genomic Data.
abstract: The genome sequences of many important Triticeae species, including bread wheat ( L.) and barley ( L.), remained uncharacterized for a long time because their high repeat content, large sizes, and polyploidy. As a result of improvements in sequencing technologies and novel analyses strategies, several of these have recently been deciphered. These efforts have generated new insights into Triticeae biology and genome organization and have important implications for downstream usage by breeders, experimental biologists, and comparative genomicists. transPLANT () is an EU-funded project aimed at constructing hardware, software, and data infrastructure for genome-scale research in the life sciences. Since the Triticeae data are intrinsically complex, heterogenous, and distributed, the transPLANT consortium has undertaken efforts to develop common data formats and tools that enable the exchange and integration of data from distributed resources. Here we present an overview of the individual Triticeae genome resources hosted by transPLANT partners, introduce the objectives of transPLANT, and outline common developments and interfaces supporting integrated data access.
authors.forename: Manuel
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authors.lastname: Spannagl
authors.forename: Michael
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authors.lastname: Alaux
authors.forename: Matthias
authors.initials: M
authors.lastname: Lange
authors.forename: Daniel M
authors.initials: DM
authors.lastname: Bolser
authors.forename: Kai C
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authors.lastname: Bader
authors.forename: Thomas
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authors.lastname: Letellier
authors.forename: Erik
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authors.lastname: Kimmel
authors.forename: Raphael
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authors.lastname: Flores
authors.forename: Cyril
authors.initials: C
authors.lastname: Pommier
authors.forename: Arnaud
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authors.lastname: Kerhornou
authors.forename: Brandon
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authors.lastname: Walts
authors.forename: Thomas
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authors.lastname: Nussbaumer
authors.forename: Christoph
authors.initials: C
authors.lastname: Grabmuller
authors.forename: Jinbo
authors.initials: J
authors.lastname: Chen
authors.forename: Christian
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authors.lastname: Colmsee
authors.forename: Sebastian
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authors.lastname: Beier
authors.forename: Martin
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authors.lastname: Mascher
authors.forename: Thomas
authors.initials: T
authors.lastname: Schmutzer
authors.forename: Daniel
authors.initials: D
authors.lastname: Arend
authors.forename: Anil
authors.initials: A
authors.lastname: Thanki
authors.forename: Ricardo
authors.initials: R
authors.lastname: Ramirez-Gonzalez
authors.forename: Martin
authors.initials: M
authors.lastname: Ayling
authors.forename: Sarah
authors.initials: S
authors.lastname: Ayling
authors.forename: Mario
authors.initials: M
authors.lastname: Caccamo
authors.forename: Klaus F X
authors.initials: KF
authors.lastname: Mayer
authors.forename: Uwe
authors.initials: U
authors.lastname: Scholz
authors.forename: Delphine
authors.initials: D
authors.lastname: Steinbach
authors.forename: Hadi
authors.initials: H
authors.lastname: Quesneville
authors.forename: Paul J
authors.initials: PJ
authors.lastname: Kersey
mesh_terms: D019143:Evolution, Molecular; D018745:Genome, Plant; D023281:Genomics / Q000379:methods*; D001467:Hordeum / Q000235:genetics; D006109:Poaceae / Q000235:genetics*; D011123:Polyploidy; D014908:Triticum / Q000235:genetics