title: Polynucleobacter wuianus sp. nov., a free-living freshwater bacterium affiliated with the cryptic species complex PnecC.
abstract: Strain QLW-P1FAT50C-4T, isolated from a shallow, acidic freshwater pond located in the Austrian Alps at an altitude of 1300 m, was characterized by investigation of phenotypic, chemotaxonomic and genomic traits. As shown previously, phylogenetic analyses based on 16S rRNA gene sequences placed the strain in the cryptic species complex PnecC within the genus Polynucleobacter. The major fatty acids of the strain were C16 : 1ω7c and C18 : 1ω7c. The strain has a genome of 2.23 Mbp with a DNA G+C content of 44.9 mol%. The strain encodes a seemingly complete gene cluster for anoxygenic photosynthesis but lacks typical genes for CO2 assimilation. In order to resolve the phylogenetic position of the strain within the species complex PnecC, concatenated partial sequences of eight housekeeping genes were analysed. The phylogenetic reconstruction obtained did not place strain QLW-P1FAT50C-4T close to any of the five previously described species within subcluster PnecC. Pairwise average nucleotide identity (ANI) comparisons of whole-genome sequences suggested that strain QLW-P1FAT50C-4T (=DSM 24008T=CIP 111100T) represents a novel species, for which we propose the name Polynucleobacter wuianus sp. nov.
authors.affiliation: Research Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
authors.forename: Martin W
authors.initials: MW
authors.lastname: Hahn
authors.affiliation: Research Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
authors.forename: Lesley R
authors.initials: LR
authors.lastname: Huymann
authors.affiliation: Research Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
authors.forename: Ulrike
authors.initials: U
authors.lastname: Koll
authors.affiliation: Research Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
authors.forename: Johanna
authors.initials: J
authors.lastname: Schmidt
authors.affiliation: DSMZ - Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstraße 7B, D-38124 Braunschweig, Germany.
authors.forename: Elke
authors.initials: E
authors.lastname: Lang
authors.affiliation: Research Institute for Limnology, University of Innsbruck, Mondseestrasse 9, Mondsee A-5310, Austria.
authors.forename: Matthias
authors.initials: M
authors.lastname: Hoetzinger
mesh_terms: D001317:Austria; D015373:Bacterial Typing Techniques; D001482:Base Composition; D042521:Burkholderiaceae / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification; D004269:DNA, Bacterial / Q000235:genetics; D005227:Fatty Acids / Q000737:chemistry; D005618:Fresh Water / Q000382:microbiology*; D010802:Phylogeny; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D017422:Sequence Analysis, DNA
chemical_list: D004269:DNA, Bacterial; D005227:Fatty Acids; D012336:RNA, Ribosomal, 16S