title: Co-regulation of Iron Metabolism and Virulence Associated Functions by Iron and XibR, a Novel Iron Binding Transcription Factor, in the Plant Pathogen Xanthomonas.
abstract: Abilities of bacterial pathogens to adapt to the iron limitation present in hosts is critical to their virulence. Bacterial pathogens have evolved diverse strategies to coordinately regulate iron metabolism and virulence associated functions to maintain iron homeostasis in response to changing iron availability in the environment. In many bacteria the ferric uptake regulator (Fur) functions as transcription factor that utilize ferrous form of iron as cofactor to regulate transcription of iron metabolism and many cellular functions. However, mechanisms of fine-tuning and coordinated regulation of virulence associated function beyond iron and Fur-Fe2+ remain undefined. In this study, we show that a novel transcriptional regulator XibR (named Xanthomonas iron binding regulator) of the NtrC family, is required for fine-tuning and co-coordinately regulating the expression of several iron regulated genes and virulence associated functions in phytopathogen Xanthomonas campestris pv. campestris (Xcc). Genome wide expression analysis of iron-starvation stimulon and XibR regulon, GUS assays, genetic and functional studies of xibR mutant revealed that XibR positively regulates functions involved in iron storage and uptake, chemotaxis, motility and negatively regulates siderophore production, in response to iron. Furthermore, chromatin immunoprecipitation followed by quantitative real-time PCR indicated that iron promoted binding of the XibR to the upstream regulatory sequence of operon's involved in chemotaxis and motility. Circular dichroism spectroscopy showed that purified XibR bound ferric form of iron. Electrophoretic mobility shift assay revealed that iron positively affected the binding of XibR to the upstream regulatory sequences of the target virulence genes, an effect that was reversed by ferric iron chelator deferoxamine. Taken together, these data revealed that how XibR coordinately regulates virulence associated and iron metabolism functions in Xanthomonads in response to iron availability. Our results provide insight of the complex regulatory mechanism of fine-tuning of virulence associated functions with iron availability in this important group of phytopathogen.
authors.affiliation: Centre for DNA Fingerprinting and Diagnostics, Nampally, India.|Graduate studies, Manipal University, Manipal, India.
authors.forename: Sheo Shankar
authors.initials: SS
authors.lastname: Pandey
authors.affiliation: Centre for DNA Fingerprinting and Diagnostics, Nampally, India.
authors.forename: Pradeep Kumar
authors.initials: PK
authors.lastname: Patnana
authors.affiliation: Centre for DNA Fingerprinting and Diagnostics, Nampally, India.
authors.forename: Santosh Kumar
authors.initials: SK
authors.lastname: Lomada
authors.affiliation: Centre for DNA Fingerprinting and Diagnostics, Nampally, India.
authors.forename: Archana
authors.initials: A
authors.lastname: Tomar
authors.affiliation: Centre for DNA Fingerprinting and Diagnostics, Nampally, India.
authors.forename: Subhadeep
authors.initials: S
authors.lastname: Chatterjee
mesh_terms: D001426:Bacterial Proteins / Q000378:metabolism; D047369:Chromatin Immunoprecipitation; D002942:Circular Dichroism; D024202:Electrophoretic Mobility Shift Assay; D015964:Gene Expression Regulation, Bacterial / Q000502:physiology*; D055106:Genome-Wide Association Study; D007501:Iron / Q000378:metabolism*; D020411:Oligonucleotide Array Sequence Analysis; D060888:Real-Time Polymerase Chain Reaction; D014157:Transcription Factors / Q000378:metabolism; D059467:Transcriptome; D014774:Virulence / Q000502:physiology*; D014974:Xanthomonas / Q000378:metabolism* / Q000472:pathogenicity*
chemical_list: D001426:Bacterial Proteins; D014157:Transcription Factors; D007501:Iron