title: Genetic diversity and genomic strategies for improving drought and waterlogging tolerance in soybeans.
abstract: Drought and its interaction with high temperature are the major abiotic stress factors affecting soybean yield and production stability. Ongoing climate changes are anticipated to intensify drought events, which will further impact crop production and food security. However, excessive water also limits soybean production. The success of soybean breeding programmes for crop improvement is dependent on the extent of genetic variation present in the germplasm base. Screening for natural genetic variation in drought- and flooding tolerance-related traits, including root system architecture, water and nitrogen-fixation efficiency, and yield performance indices, has helped to identify the best resources for genetic studies in soybean. Genomic resources, including whole-genome sequences of diverse germplasms, millions of single-nucleotide polymorphisms, and high-throughput marker genotyping platforms, have expedited gene and marker discovery for translational genomics in soybean. This review highlights the current knowledge of the genetic diversity and quantitative trait loci associated with root system architecture, canopy wilting, nitrogen-fixation ability, and flooding tolerance that contributes to the understanding of drought- and flooding-tolerance mechanisms in soybean. Next-generation mapping approaches and high-throughput phenotyping will facilitate a better understanding of phenotype-genotype associations and help to formulate genomic-assisted breeding strategies, including genomic selection, in soybean for tolerance to drought and flooding stress.
authors.affiliation: Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA.
authors.forename: Babu
authors.initials: B
authors.lastname: Valliyodan
authors.affiliation: Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA.
authors.forename: Heng
authors.initials: H
authors.lastname: Ye
authors.affiliation: Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA.
authors.forename: Li
authors.initials: L
authors.lastname: Song
authors.affiliation: Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA.
authors.forename: MacKensie
authors.initials: M
authors.lastname: Murphy
authors.affiliation: Division of Plant Sciences, University of Missouri-Fisher Delta Research Center, Portageville, MO 63873, USA.
authors.forename: J Grover
authors.initials: JG
authors.lastname: Shannon
authors.affiliation: Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA.
authors.forename: Henry T
authors.initials: HT
authors.lastname: Nguyen
mesh_terms: D000222:Adaptation, Physiological / Q000235:genetics*; D002874:Chromosome Mapping; D018556:Crops, Agricultural / Q000235:genetics / Q000502:physiology; D055864:Droughts; D007887:Fabaceae / Q000235:genetics* / Q000502:physiology*; D055868:Floods; D014644:Genetic Variation; D023281:Genomics; D000069600:Plant Breeding; D018517:Plant Roots / Q000235:genetics* / Q000502:physiology*; D040641:Quantitative Trait Loci; D013025:Glycine max / Q000235:genetics* / Q000502:physiology*
keywords: Drought; genomics; genomics-assisted breeding; soybean; stress tolerance; waterlogging.