title: ReconMap: an interactive visualization of human metabolism.
abstract: A genome-scale reconstruction of human metabolism, Recon 2, is available but no interface exists to interactively visualize its content integrated with omics data and simulation results.
  
  
  
  We manually drew a comprehensive map, ReconMap 2.0, that is consistent with the content of Recon 2. We present it within a web interface that allows content query, visualization of custom datasets and submission of feedback to manual curators.
  
  
  
  ReconMap can be accessed via http://vmh.uni.lu , with network export in a Systems Biology Graphical Notation compliant format released under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. A Constraint-Based Reconstruction and Analysis (COBRA) Toolbox extension to interact with ReconMap is available via https://github.com/opencobra/cobratoolbox .
  
  
  
  ronan.mt.fleming@gmail.com.
authors.affiliation: Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, Esch-sur-Alzette, Luxembourg.
authors.forename: Alberto
authors.initials: A
authors.lastname: Noronha
authors.affiliation: Center for Systems Biology, University of Iceland, Reykjavik, Iceland.
authors.forename: Anna Dröfn
authors.initials: AD
authors.lastname: Daníelsdóttir
authors.affiliation: Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, Esch-sur-Alzette, Luxembourg.
authors.forename: Piotr
authors.initials: P
authors.lastname: Gawron
authors.affiliation: Center for Systems Biology, University of Iceland, Reykjavik, Iceland.
authors.forename: Freyr
authors.initials: F
authors.lastname: Jóhannsson
authors.affiliation: Center for Systems Biology, University of Iceland, Reykjavik, Iceland.
authors.forename: Soffía
authors.initials: S
authors.lastname: Jónsdóttir
authors.affiliation: Center for Systems Biology, University of Iceland, Reykjavik, Iceland.
authors.forename: Sindri
authors.initials: S
authors.lastname: Jarlsson
authors.affiliation: Center for Systems Biology, University of Iceland, Reykjavik, Iceland.
authors.forename: Jón Pétur
authors.initials: JP
authors.lastname: Gunnarsson
authors.affiliation: Center for Systems Biology, University of Iceland, Reykjavik, Iceland.
authors.forename: Sigurður
authors.initials: S
authors.lastname: Brynjólfsson
authors.affiliation: Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, Esch-sur-Alzette, Luxembourg.
authors.forename: Reinhard
authors.initials: R
authors.lastname: Schneider
authors.affiliation: Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, Esch-sur-Alzette, Luxembourg.
authors.forename: Ines
authors.initials: I
authors.lastname: Thiele
authors.affiliation: Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, Esch-sur-Alzette, Luxembourg.
authors.forename: Ronan M T
authors.initials: RM
authors.lastname: Fleming
mesh_terms: D016208:Databases, Factual; D015894:Genome, Human; D006801:Humans; D053858:Metabolic Networks and Pathways; D012984:Software; D049490:Systems Biology / Q000379:methods*