title: The Evolution of Soybean Knowledge Base (SoyKB).
abstract: Soybean Knowledge Base (SoyKB) is a comprehensive all-inclusive web resource for bridging the gap between soybean translational genomics and molecular breeding. It provides information for six entities including genes/proteins, microRNAs (miRNAs)/small interfering RNAs (sRNA), metabolites, single nucleotide polymorphisms (SNPs), and plant introduction lines and traits. It has a user-friendly web interface publicly available at http://soykb.org , which integrates and presents data in an intuitive manner to the soybean researchers, breeders, and consumers. It incorporates several informatics and analytical tools for integrating and merging various multi-omics datasets.
authors.affiliation: Department of Molecular Microbiology and Immunology, Medical Research Office School of Medicine, Informatics Institute, University of Missouri, 1201 E Rollins St., 271B LSC, Columbia, MO, 65201, USA. joshitr@missouri.edu.|Department of Computer Science, Christopher S. Bond Life Science Center, University of Missouri, Columbia, MO, USA. joshitr@missouri.edu.
authors.forename: Trupti
authors.initials: T
authors.lastname: Joshi
authors.affiliation: Department of Computer Science, Christopher S. Bond Life Science Center, University of Missouri, Columbia, MO, USA.
authors.forename: Jiaojiao
authors.initials: J
authors.lastname: Wang
authors.affiliation: Department of Computer Science, Christopher S. Bond Life Science Center, University of Missouri, Columbia, MO, USA.
authors.forename: Hongxin
authors.initials: H
authors.lastname: Zhang
authors.affiliation: Department of Computer Science, Christopher S. Bond Life Science Center, University of Missouri, Columbia, MO, USA.
authors.forename: Shiyuan
authors.initials: S
authors.lastname: Chen
authors.affiliation: Department of Computer Science, Christopher S. Bond Life Science Center, University of Missouri, Columbia, MO, USA.
authors.forename: Shuai
authors.initials: S
authors.lastname: Zeng
authors.affiliation: Department of Computer Science, Christopher S. Bond Life Science Center, University of Missouri, Columbia, MO, USA.
authors.forename: Bowei
authors.initials: B
authors.lastname: Xu
authors.affiliation: Department of Computer Science, Christopher S. Bond Life Science Center, University of Missouri, Columbia, MO, USA.
authors.forename: Dong
authors.initials: D
authors.lastname: Xu
mesh_terms: D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D018745:Genome, Plant; D023281:Genomics / Q000379:methods; D055432:Metabolomics / Q000379:methods; D040901:Proteomics / Q000379:methods; D012984:Software; D013025:Glycine max / Q000235:genetics* / Q000378:metabolism*; D014584:User-Computer Interface; D064878:Web Browser
keywords: Database; Genomics; Glycine max; Knowledge base; Metabolomics; Multi-omics; Proteomics; SoyKB; Soybean; Transcriptomics