title: Using Functional or Structural Magnetic Resonance Images and Personal Characteristic Data to Identify ADHD and Autism.
abstract: A clinical tool that can diagnose psychiatric illness using functional or structural magnetic resonance (MR) brain images has the potential to greatly assist physicians and improve treatment efficacy. Working toward the goal of automated diagnosis, we propose an approach for automated classification of ADHD and autism based on histogram of oriented gradients (HOG) features extracted from MR brain images, as well as personal characteristic data features. We describe a learning algorithm that can produce effective classifiers for ADHD and autism when run on two large public datasets. The algorithm is able to distinguish ADHD from control with hold-out accuracy of 69.6% (over baseline 55.0%) using personal characteristics and structural brain scan features when trained on the ADHD-200 dataset (769 participants in training set, 171 in test set). It is able to distinguish autism from control with hold-out accuracy of 65.0% (over baseline 51.6%) using functional images with personal characteristic data when trained on the Autism Brain Imaging Data Exchange (ABIDE) dataset (889 participants in training set, 222 in test set). These results outperform all previously presented methods on both datasets. To our knowledge, this is the first demonstration of a single automated learning process that can produce classifiers for distinguishing patients vs. controls from brain imaging data with above-chance accuracy on large datasets for two different psychiatric illnesses (ADHD and autism). Working toward clinical applications requires robustness against real-world conditions, including the substantial variability that often exists among data collected at different institutions. It is therefore important that our algorithm was successful with the large ADHD-200 and ABIDE datasets, which include data from hundreds of participants collected at multiple institutions. While the resulting classifiers are not yet clinically relevant, this work shows that there is a signal in the (f)MRI data that a learning algorithm is able to find. We anticipate this will lead to yet more accurate classifiers, over these and other psychiatric disorders, working toward the goal of a clinical tool for high accuracy differential diagnosis.
authors.affiliation: Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada.|Alberta Machine Learning Institute (AMII), formerly Alberta Innovates Centre for Machine Learning (AICML), Edmonton, Alberta, Canada.
authors.forename: Sina
authors.initials: S
authors.lastname: Ghiassian
authors.affiliation: Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada.|Alberta Machine Learning Institute (AMII), formerly Alberta Innovates Centre for Machine Learning (AICML), Edmonton, Alberta, Canada.
authors.forename: Russell
authors.initials: R
authors.lastname: Greiner
authors.affiliation: Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada.|Alberta Machine Learning Institute (AMII), formerly Alberta Innovates Centre for Machine Learning (AICML), Edmonton, Alberta, Canada.
authors.forename: Ping
authors.initials: P
authors.lastname: Jin
authors.affiliation: Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada.|Department of Psychiatry, University of Alberta, Edmonton, Alberta, Canada.|Alberta Machine Learning Institute (AMII), formerly Alberta Innovates Centre for Machine Learning (AICML), Edmonton, Alberta, Canada.
authors.forename: Matthew R G
authors.initials: MR
authors.lastname: Brown
mesh_terms: D000465:Algorithms; D001289:Attention Deficit Disorder with Hyperactivity / Q000000981:diagnostic imaging* / Q000473:pathology* / Q000503:physiopathology; D001321:Autistic Disorder / Q000000981:diagnostic imaging* / Q000473:pathology* / Q000503:physiopathology; D016022:Case-Control Studies; D002648:Child; D005260:Female; D059907:Functional Neuroimaging; D006801:Humans; D000069550:Machine Learning; D008279:Magnetic Resonance Imaging; D008297:Male; D008490:Medical Informatics / Q000379:methods*