title: Cultivation of Caenorhabditis elegans in Three Dimensions in the Laboratory.
abstract: The use of genetic model organisms such as Caenorhabditis elegans has led to seminal discoveries in biology over the last five decades. Most of what we know about C. elegans is limited to laboratory cultivation of the nematodes that may not necessarily reflect the environments they normally inhabit in nature. Cultivation of C. elegans in a 3D habitat that is more similar to the 3D matrix that worms encounter in rotten fruits and vegetative compost in nature could reveal novel phenotypes and behaviors not observed in 2D. In addition, experiments in 3D can address how phenotypes we observe in 2D are relevant for the worm in nature. Here, a new method in which C. elegans grows and reproduces normally in three dimensions is presented. Cultivation of C. elegans in Nematode Growth Tube-3D (NGT-3D) can allow us to measure the reproductive fitness of C. elegans strains or different conditions in a 3D environment. We also present a novel method, termed Nematode Growth Bottle-3D (NGB-3D), to cultivate C. elegans in 3D for microscopic analysis. These methods allow scientists to study C. elegans biology in conditions that are more reflective of the environments they encounter in nature. These can help us to understand the overlying evolutionary relevance of the physiology and behavior of C. elegans we observe in the laboratory.
authors.affiliation: Division of Biological Science and Technology, Yonsei University.
authors.forename: Tong Y
authors.initials: TY
authors.lastname: Lee
authors.affiliation: Division of Biological Science and Technology, Yonsei University.
authors.forename: Kyoung-Hye
authors.initials: KH
authors.lastname: Yoon
authors.affiliation: Division of Biological Science and Technology, Yonsei University; jinillee@yonsei.ac.kr.
authors.forename: Jin I
authors.initials: JI
authors.lastname: Lee
mesh_terms: D000220:Adaptation, Biological / Q000502:physiology; D000818:Animals; D017173:Caenorhabditis elegans / Q000502:physiology; D017753:Ecosystem; D004777:Environment; D010641:Phenotype; D012987:Soil
chemical_list: D012987:Soil