title: Structure-Function Network Mapping and Its Assessment via Persistent Homology.
abstract: Understanding the relationship between brain structure and function is a fundamental problem in network neuroscience. This work deals with the general method of structure-function mapping at the whole-brain level. We formulate the problem as a topological mapping of structure-function connectivity via matrix function, and find a stable solution by exploiting a regularization procedure to cope with large matrices. We introduce a novel measure of network similarity based on persistent homology for assessing the quality of the network mapping, which enables a detailed comparison of network topological changes across all possible thresholds, rather than just at a single, arbitrary threshold that may not be optimal. We demonstrate that our approach can uncover the direct and indirect structural paths for predicting functional connectivity, and our network similarity measure outperforms other currently available methods. We systematically validate our approach with (1) a comparison of regularized vs. non-regularized procedures, (2) a null model of the degree-preserving random rewired structural matrix, (3) different network types (binary vs. weighted matrices), and (4) different brain parcellation schemes (low vs. high resolutions). Finally, we evaluate the scalability of our method with relatively large matrices (2514x2514) of structural and functional connectivity obtained from 12 healthy human subjects measured non-invasively while at rest. Our results reveal a nonlinear structure-function relationship, suggesting that the resting-state functional connectivity depends on direct structural connections, as well as relatively parsimonious indirect connections via polysynaptic pathways.
authors.affiliation: School of Biomedical Engineering, Science & Health Systems, Drexel University, Philadelphia, PA, United States of America.
authors.forename: Hualou
authors.identifier: 0000-0002-3805-1837
authors.initials: H
authors.lastname: Liang
authors.affiliation: Center for Biomedical Informatics, Texas A&M University Health Science Center, Houston, TX, United States of America.
authors.forename: Hongbin
authors.identifier: 0000-0003-3811-8015
authors.initials: H
authors.lastname: Wang
mesh_terms: D000465:Algorithms; D001921:Brain / Q000033:anatomy & histology / Q000502:physiology*; D001931:Brain Mapping / Q000379:methods*; D019295:Computational Biology; D016208:Databases, Factual; D006801:Humans