title: De novotranscriptome assembly of shrimpPalaemon serratus.
abstract: The shrimpPalaemon serratusis a coastal decapod crustacean with a high commercial value. It is harvested for human consumption. In this study, we used Illumina sequencing technology (HiSeq 2000) to sequence, assemble and annotate the transcriptome ofP. serratus. RNA was isolated from muscle of adults individuals and, from a pool of larvae. A total number of 4 cDNA libraries were constructed, using the TruSeq RNA Sample Preparation Kit v2. The raw data in this study was deposited in NCBI SRA database with study accession number of SRP090769. The obtained data were subjected tode novotranscriptome assembly using Trinity software, and coding regions were predicted by TransDecoder. We used Blastp and Sma3s to annotate the identified proteins. The transcriptome data could provide some insight into the understanding of genes involved in the larval development and metamorphosis.
  [Table: see text].
authors.affiliation: Department of Cell and Molecular Biology, Evolutionary Biology Group (GIBE), Universidade da Coruña, A Fraga 10, E-15008 A Coruña, Spain; Centro de Investigaciones Científicas Avanzadas (CICA), Universidade da Coruña, 15071 A Coruña, Spain.
authors.forename: Alejandra
authors.initials: A
authors.lastname: Perina
authors.affiliation: Department of Cell and Molecular Biology, Evolutionary Biology Group (GIBE), Universidade da Coruña, A Fraga 10, E-15008 A Coruña, Spain; Centro de Investigaciones Científicas Avanzadas (CICA), Universidade da Coruña, 15071 A Coruña, Spain.
authors.forename: Ana M
authors.initials: AM
authors.lastname: González-Tizón
authors.affiliation: aCore, Falperra 36, E-15005 A Coruña, Spain.
authors.forename: Iago F
authors.initials: IF
authors.lastname: Meilán
authors.affiliation: Department of Cell and Molecular Biology, Evolutionary Biology Group (GIBE), Universidade da Coruña, A Fraga 10, E-15008 A Coruña, Spain; Centro de Investigaciones Científicas Avanzadas (CICA), Universidade da Coruña, 15071 A Coruña, Spain.
authors.forename: Andrés
authors.initials: A
authors.lastname: Martínez-Lage
keywords: Illumina; Larvae; Muscle; Palaemon serratus; RNA-seq; Transcriptome