title: Complete nucleotide sequence of a novel strain of fig fleck-associated virus from China.
abstract: The complete nucleotide sequence of fig fleck-associated virus from Xinjiang Uygur Autonomous Region of China (FFkaV-CN) was determined. The 6,723-nucleotide-long viral genome, excluding a terminal poly(A) tail, contains three open reading frames (ORFs). Pairwise comparisons showed that FFkaV-CN shares 83% and 92% sequence identity with FFkaV-Italy based on the complete genomic sequence and CP aa sequence, respectively, slightly higher than the species demarcation criterion for the genus Maculavirus. Phylogenetic analysis showed that FFkaV-CN and FFkaV-Italy clustered into one group. These results indicate that FFkaV-CN is a novel strain of FFkaV with a genome organization somewhat different from what was reported for FFkaV-Italy.
authors.affiliation: School of Horticulture and Plant Protection, Yangzhou University, Wenhui East Road No. 48, Yangzhou, 225009, Jiangsu, People's Republic of China.|State Key Laboratory of Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Yuanmingyuan West Road No. 2, Haidian District, Beijing, 100193, People's Republic of China.
authors.forename: Zhen
authors.initials: Z
authors.lastname: He
authors.affiliation: State Key Laboratory of Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Yuanmingyuan West Road No. 2, Haidian District, Beijing, 100193, People's Republic of China.|College of Agriculture, Xinjiang Agricultural University, Nongda East Road No. 311, Urumqi, 830052, Xinjiang Uygur Autonomous Region, People's Republic of China.
authors.forename: Mahmut
authors.initials: M
authors.lastname: Mijit
authors.affiliation: State Key Laboratory of Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Yuanmingyuan West Road No. 2, Haidian District, Beijing, 100193, People's Republic of China.
authors.forename: Shifang
authors.initials: S
authors.lastname: Li
authors.affiliation: State Key Laboratory of Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Yuanmingyuan West Road No. 2, Haidian District, Beijing, 100193, People's Republic of China. zhzhxiang2003@163.com.
authors.forename: Zhixiang
authors.initials: Z
authors.lastname: Zhang
mesh_terms: D001483:Base Sequence; D002681:China; D030681:Ficus / Q000821:virology*; D016679:Genome, Viral; D007558:Italy; D008969:Molecular Sequence Data; D016366:Open Reading Frames; D010802:Phylogeny; D010935:Plant Diseases / Q000821:virology*; D012367:RNA, Viral / Q000235:genetics; D046830:Tymoviridae / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification; D014764:Viral Proteins / Q000235:genetics
chemical_list: D012367:RNA, Viral; D014764:Viral Proteins