title: Small RNA sequencing of cryopreserved semen from single bull revealed altered miRNAs and piRNAs expression between High- and Low-motile sperm populations.
abstract: Small RNAs present in bovine ejaculate can be linked to sperm abnormalities and fertility disorders. At present, quality parameters routinely used in semen evaluation are not fully reliable to predict bull fertility. In order to provide additional quality measurements for cryopreserved semen used for breeding, a method based on deep sequencing of sperm microRNA (miRNA) and Piwi-interacting RNA (piRNA) from individual bulls was developed. To validate our method, two populations of spermatozoa isolated from high and low motile fractions separated by Percoll were sequenced, and their small RNAs content characterized.
  
  
  
  Sperm cells from frozen thawed semen samples of 4 bulls were successfully separated in two fractions. We identified 83 miRNAs and 79 putative piRNAs clusters that were differentially expressed in both fractions. Gene pathways targeted by 40 known differentially expressed miRNAs were related to apoptosis. Dysregulation of miR-17-5p, miR-26a-5p, miR-486-5p, miR-122-5p, miR-184 and miR-20a-5p was found to target three pathways (PTEN, PI3K/AKT and STAT).
  
  
  
  Small RNAs sequencing data obtained from single bulls are consistent with previous findings. Specific miRNAs are differentially represented in low versus high motile sperm, suggesting an alteration of cell functions and increased germ cell apoptosis in the low motile fraction.
authors.affiliation: Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, via Einstein, 26900, Lodi, Italy.
authors.forename: E
authors.initials: E
authors.lastname: Capra
authors.affiliation: Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, via Einstein, 26900, Lodi, Italy.
authors.forename: F
authors.initials: F
authors.lastname: Turri
authors.affiliation: Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, via Einstein, 26900, Lodi, Italy.|Parco Tecnologico Padano, via Einstein, 26900, Lodi, Italy.
authors.forename: B
authors.initials: B
authors.lastname: Lazzari
authors.affiliation: Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, via Einstein, 26900, Lodi, Italy.
authors.forename: P
authors.initials: P
authors.lastname: Cremonesi
authors.affiliation: Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, via Einstein, 26900, Lodi, Italy.
authors.forename: T M
authors.initials: TM
authors.lastname: Gliozzi
authors.affiliation: Parco Tecnologico Padano, via Einstein, 26900, Lodi, Italy.
authors.forename: I
authors.initials: I
authors.lastname: Fojadelli
authors.affiliation: Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, via Einstein, 26900, Lodi, Italy.|Parco Tecnologico Padano, via Einstein, 26900, Lodi, Italy.
authors.forename: A
authors.initials: A
authors.lastname: Stella
authors.affiliation: Istituto di Biologia e Biotecnologia Agraria, Consiglio Nazionale delle Ricerche, via Einstein, 26900, Lodi, Italy. pizzi@ibba.cnr.it.
authors.forename: F
authors.initials: F
authors.lastname: Pizzi
mesh_terms: D000818:Animals; D002417:Cattle; D002469:Cell Separation / Q000379:methods; D016000:Cluster Analysis; D015925:Cryopreservation; D005786:Gene Expression Regulation; D059014:High-Throughput Nucleotide Sequencing; D008297:Male; D035683:MicroRNAs / Q000235:genetics*; D008954:Models, Biological; D034622:RNA Interference; D034741:RNA, Small Interfering / Q000235:genetics*; D058727:RNA, Small Untranslated / Q000235:genetics*; D012661:Semen / Q000378:metabolism*; D015398:Signal Transduction; D013081:Sperm Motility / Q000235:genetics*
chemical_list: D035683:MicroRNAs; D034741:RNA, Small Interfering; D058727:RNA, Small Untranslated
keywords: Cryopreserved; Sequencing; Sperm; miRNA; piRNA