title: Numerical simulations of piecewise deterministic Markov processes with an application to the stochastic Hodgkin-Huxley model.
abstract: The stochastic Hodgkin-Huxley model is one of the best-known examples of piecewise deterministic Markov processes (PDMPs), in which the electrical potential across a cell membrane, V(t), is coupled with a mesoscopic Markov jump process representing the stochastic opening and closing of ion channels embedded in the membrane. The rates of the channel kinetics, in turn, are voltage-dependent. Due to this interdependence, an accurate and efficient sampling of the time evolution of the hybrid stochastic systems has been challenging. The current exact simulation methods require solving a voltage-dependent hitting time problem for multiple path-dependent intensity functions with random thresholds. This paper proposes a simulation algorithm that approximates an alternative representation of the exact solution by fitting the log-survival function of the inter-jump dwell time, H(t), with a piecewise linear one. The latter uses interpolation points that are chosen according to the time evolution of the H(t), as the numerical solution to the coupled ordinary differential equations of V(t) and H(t). This computational method can be applied to all PDMPs. Pathwise convergence of the approximated sample trajectories to the exact solution is proven, and error estimates are provided. Comparison with a previous algorithm that is based on piecewise constant approximation is also presented.
authors.affiliation: Department of Mathematics, Zhejiang Normal University, Zhejiang 321004, People's Republic of China.
authors.forename: Shaojie
authors.initials: S
authors.lastname: Ding
authors.affiliation: School of Mathematical Sciences, Peking University, Beijing 100087, People's Republic of China.
authors.forename: Min
authors.initials: M
authors.lastname: Qian
authors.affiliation: Department of Applied Mathematics, University of Washington, Seattle, Washington 98195, USA.
authors.forename: Hong
authors.initials: H
authors.lastname: Qian
authors.affiliation: Department of Mathematics, Zhejiang Normal University, Zhejiang 321004, People's Republic of China.
authors.forename: Xuejuan
authors.initials: X
authors.lastname: Zhang