title: Building a DNA barcode library of Alaska's non-marine arthropods.
abstract: Climate change may result in ecological futures with novel species assemblages, trophic mismatch, and mass extinction. Alaska has a limited taxonomic workforce to address these changes. We are building a DNA barcode library to facilitate a metabarcoding approach to monitoring non-marine arthropods. Working with the Canadian Centre for DNA Barcoding, we obtained DNA barcodes from recently collected and authoritatively identified specimens in the University of Alaska Museum (UAM) Insect Collection and the Kenai National Wildlife Refuge collection. We submitted tissues from 4776 specimens, of which 81% yielded DNA barcodes representing 1662 species and 1788 Barcode Index Numbers (BINs), of primarily terrestrial, large-bodied arthropods. This represents 84% of the species available for DNA barcoding in the UAM Insect Collection. There are now 4020 Alaskan arthropod species represented by DNA barcodes, after including all records in Barcode of Life Data Systems (BOLD) of species that occur in Alaska - i.e., 48.5% of the 8277 Alaskan, non-marine-arthropod, named species have associated DNA barcodes. An assessment of the identification power of the library in its current state yielded fewer species-level identifications than expected, but the results were not discouraging. We believe we are the first to deliberately begin development of a DNA barcode library of the entire arthropod fauna for a North American state or province. Although far from complete, this library will become increasingly valuable as more species are added and costs to obtain DNA sequences fall.
authors.affiliation: a University of Alaska Museum, Fairbanks, AK 99775-6960, USA.
authors.forename: Derek S
authors.initials: DS
authors.lastname: Sikes
authors.affiliation: b U.S. Fish and Wildlife Service, Kenai National Wildlife Refuge, P.O. Box 2139, Soldotna, AK 99669, USA.
authors.forename: Matthew
authors.initials: M
authors.lastname: Bowser
authors.affiliation: b U.S. Fish and Wildlife Service, Kenai National Wildlife Refuge, P.O. Box 2139, Soldotna, AK 99669, USA.
authors.forename: John M
authors.initials: JM
authors.lastname: Morton
authors.affiliation: a University of Alaska Museum, Fairbanks, AK 99775-6960, USA.
authors.forename: Casey
authors.initials: C
authors.lastname: Bickford
authors.affiliation: a University of Alaska Museum, Fairbanks, AK 99775-6960, USA.|c University of Kentucky, S-225 Ag. Sci. N, Lexington, KY 40546-0091, USA.
authors.forename: Sarah
authors.initials: S
authors.lastname: Meierotto
authors.affiliation: a University of Alaska Museum, Fairbanks, AK 99775-6960, USA.
authors.forename: Kyndall
authors.initials: K
authors.lastname: Hildebrandt
mesh_terms: D000413:Alaska; D000818:Animals; D001181:Arthropods / Q000235:genetics*; D044822:Biodiversity; D002170:Canada; D004247:DNA / Q000032:analysis; D058893:DNA Barcoding, Taxonomic / Q000379:methods*; D004463:Ecology; D015723:Gene Library; D014644:Genetic Variation; D005843:Geography; D007313:Insecta / Q000235:genetics*; D008957:Models, Genetic; D010802:Phylogeny; D017422:Sequence Analysis, DNA; D013045:Species Specificity; D013696:Temperature
chemical_list: D004247:DNA
keywords: Arthropoda; DNA barcoding; biodiversity; biodiversité; codage à barres de l’ADN; inventaire; inventory; monitoring