title: Deciphering the mechanistic insight into the stoichiometric ratio dependent behavior of Cu(II) on BSA fibrillation.
abstract: Various metal ions are recently implicated in protein aggregates and are associated with numerous neurodegenerative diseases. In the present work, we have scrutinized the effect of stoichiometric variation of Cu(II) on BSA fibrillation at physiological pH 7.4 through Thioflavin-T dye binding study, residual protein concentration, Fourier Transform Infrared spectroscopy (FTIR), Dynamic Light Scattering (DLS), Atomic Force Microscopy (AFM) and Isothermal Titration Calorimetry (ITC). Fibrillation kinetics was studied through ThT fluorescence, which illustrated dependency on stoichiometric ratio of Cu(II). The ThT intensity data were fitted to a single exponential expression to determine the aggregation rate, k, which revealed a slight lower k value for 1:1 ratio of BSA-Cu(II) reaction as compared to BSA alone whereas k value for 1:2 ratio of BSA-Cu(II) reaction was higher. Higher equilibrium residual concentration in case of 1:1 ratio of BSA-Cu(II) agreed to the lower aggregation rate. IR spectroscopy revealed the presence of increased β-sheet proportion to the detriment of α-helix conformation with increasing concentration of Cu(II) and illustrated maximum β-sheet proportion in 1:2 ratio of BSA-Cu(II). These results were combined with scattering results that showed the higher average hydrodynamic radius (Z-average value) of aggregates in 1:2 ratio of BSA-Cu(II) with respect to BSA and 1:1 ratio of BSA-Cu(II). AFM analysis confirmed the fibril formation. ITC analysis has shown the presence of two binding sites with many fold difference in binding affinity at prescribed in vitro conditions. An N-terminal binding site with many fold higher binding affinity was found as the first Cu(II) binding site. The free thiol group of the cysteine residue positioned at 34 (cys-34) in BSA was covalently capped and this modified BSA also showed the presence of two binding sites, which declined the cys-34 site as the second Cu(II) bind site. Therefore Zn(II) binding site was predicted as the second Cu(II) binding site. The binding of Cu(II) at N-terminal binding site marks a square planner geometry; while that at zinc binding site marks a rigid coordination geometry. Conclusively, analyzed data has concluded that the variation in Cu(II) efficacy in the different stoichiometric ratio results because of two different coordination types in different stoichiometric ratios.
authors.affiliation: Department of Biosciences and Bioengineering Indian Institute of Technology Guwahati, Assam, 781039, India. Electronic address: ajeet.singh@iitg.ernet.in.
authors.forename: Ajeet
authors.initials: A
authors.lastname: Singh
authors.affiliation: Centre for the Environment, Indian Institute of Technology Guwahati, Assam, 781039, India. Electronic address: poulami.datta@iitg.ernet.in.
authors.forename: Poulami
authors.initials: P
authors.lastname: Datta
authors.affiliation: Department of Biosciences and Bioengineering Indian Institute of Technology Guwahati, Assam, 781039, India; Centre for the Environment, Indian Institute of Technology Guwahati, Assam, 781039, India. Electronic address: lalitpandey@iitg.ernet.in.
authors.forename: Lalit M
authors.initials: LM
authors.lastname: Pandey
mesh_terms: D000818:Animals; D001665:Binding Sites; D002417:Cattle; D003300:Copper / Q000378:metabolism / Q000494:pharmacology*; D006863:Hydrogen-Ion Concentration; D007700:Kinetics; D008958:Models, Molecular; D066329:Protein Aggregates; D017433:Protein Structure, Secondary / Q000187:drug effects; D012710:Serum Albumin, Bovine / Q000737:chemistry* / Q000378:metabolism; D013816:Thermodynamics
chemical_list: D066329:Protein Aggregates; D012710:Serum Albumin, Bovine; D003300:Copper
keywords: Binding affinity (K(b)); Bovine serum albumin; Fibrillation; Residual protein; Thioflavin-T (ThT); Z-average value