title: The JWS online simulation database.
abstract: CONCLUSIONS
  JWS Online is a web-based platform for construction, simulation and exchange of models in standard formats. We have extended the platform with a database for curated simulation experiments that can be accessed directly via a URL, allowing one-click reproduction of published results. Users can modify the simulation experiments and export them in standard formats. The Simulation database thus lowers the bar on exploring computational models, helps users create valid simulation descriptions and improves the reproducibility of published simulation experiments.
  
  
  METHODS
  The Simulation Database is available on line at https://jjj.bio.vu.nl/models/experiments/ .
  
  
  BACKGROUND
  jls@sun.ac.za .
authors.affiliation: Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
authors.forename: Martin
authors.initials: M
authors.lastname: Peters
authors.affiliation: Department of Biochemistry, Stellenbosch University, Stellenbosch, South Africa.
authors.forename: Johann J
authors.initials: JJ
authors.lastname: Eicher
authors.affiliation: Department of Biochemistry, Stellenbosch University, Stellenbosch, South Africa.
authors.forename: David D
authors.initials: DD
authors.lastname: van Niekerk
authors.affiliation: Department of Systems Biology and Bioinformatics, University of Rostock, Rostock, Germany.
authors.forename: Dagmar
authors.initials: D
authors.lastname: Waltemath
authors.affiliation: Department of Biochemistry, Stellenbosch University, Stellenbosch, South Africa.|MIB, CEAS, University of Manchester, UK.|Molecular Cell Physiology, VU University, Amsterdam, The Netherlands.
authors.forename: Jacky L
authors.initials: JL
authors.lastname: Snoep
mesh_terms: D019295:Computational Biology / Q000379:methods*; D003198:Computer Simulation; D016208:Databases, Factual; D008954:Models, Biological; D015203:Reproducibility of Results