title: Analysis of the genetic diversity of Lonicera japonica Thumb. using inter-simple sequence repeat markers.
abstract: Inter-simple sequence repeats (ISSRs) were used to analyze the genetic diversity of 21 accessions obtained from four provinces in China, Shandong, Henan, Hebei, and Sichuan. A total of 272 scored bands were generated using the eight primers previously screened across 21 accessions, of which 267 were polymorphic (98.16%). Genetic similarity coefficients varied from 0.4816 to 0.9118, with an average of 0.6337. The UPGMA dendrogram grouped 21 accessions into two main clusters. Cluster A comprised four Lonicera macranthoides Hand. Mazz. accessions, of which J10 was found to be from Sichuan, and J17, J18, and J19 were found to be from Shandong. Cluster B comprised 17 Lonicera japonica Thumb. accessions, divided into the wild accession J16 and the other 16 cultivars. The results of the principal component analysis were comparable to the cluster analysis. Therefore, the ISSR markers could be effectively used to distinguish interspecific and intraspecific variations, which may facilitate identification of Lonicera japonica cultivars for planting, medicinal use, and germplasm conservation.
authors.affiliation: Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China.|University of Chinese Academy of Sciences, Beijing, China.
authors.forename: H Y
authors.initials: HY
authors.lastname: He
authors.affiliation: Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China daniezhang@imde.ac.cn.
authors.forename: D
authors.initials: D
authors.lastname: Zhang
authors.affiliation: Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China.|University of Chinese Academy of Sciences, Beijing, China.
authors.forename: H
authors.initials: H
authors.lastname: Qing
authors.affiliation: Yibin Branch of Sichuan Provincial Tobacco Company, Yibin, China.
authors.forename: Y
authors.initials: Y
authors.lastname: Yang
mesh_terms: D016000:Cluster Analysis; D005819:Genetic Markers; D014644:Genetic Variation; D031239:Lonicera / Q000235:genetics*; D018895:Microsatellite Repeats
chemical_list: D005819:Genetic Markers