title: M13-Tailed Simple Sequence Repeat (SSR) Markers in Studies of Genetic Diversity and Population Structure of Common Oat Germplasm.
abstract: Simple Sequence Repeat (SSR) markers are one of the most frequently used molecular markers in studies of crop diversity and population structure. This is due to their uniform distribution in the genome, the high polymorphism, reproducibility, and codominant character. Additional advantages are the possibility of automatic analysis and simple interpretation of the results. The M13 tagged PCR reaction significantly reduces the costs of analysis by the automatic genetic analyzers. Here, we also disclose a short protocol of SSR data analysis.
authors.affiliation: Department of Functional Genomics, Plant Breeding and Acclimatization Institute - National Research Institute, Błonie, Poland.
authors.forename: Agnieszka
authors.initials: A
authors.lastname: Onyśk
authors.affiliation: National Centre for Plant Genetic Resources, Plant Breeding and Acclimatization Institute - National Research Institute, Radzików, 05-870, Błonie, Poland. m.boczkowska@ihar.edu.pl.
authors.forename: Maja
authors.initials: M
authors.lastname: Boczkowska
mesh_terms: D000483:Alleles; D018554:Avena / Q000235:genetics*; D017104:Bacteriophage M13 / Q000235:genetics*; D030561:Databases, Nucleic Acid; D005819:Genetic Markers; D014644:Genetic Variation; D018895:Microsatellite Repeats; D016133:Polymerase Chain Reaction; D012639:Seeds / Q000235:genetics*
chemical_list: D005819:Genetic Markers
keywords: Avena sativa L; Diversity; Germplasm; M13; Population structure; SSR