Statistical power and prediction accuracy in multisite resting-state fMRI connectivity.
Connectivity studies using resting-state functional magnetic resonance imaging are increasingly pooling data acquired at multiple sites. While this may allow investigators to speed up recruitment or increase sample size, multisite studies also potentially introduce systematic biases in connectivity measures across sites. In this work, we measure the inter-site effect in connectivity and its impact on our ability to detect individual and group differences. Our study was based on real, as opposed to simulated, multisite fMRI datasets collected in N=345 young, healthy subjects across 8 scanning sites with 3T scanners and heterogeneous scanning protocols, drawn from the 1000 functional connectome project. We first empirically show that typical functional networks were reliably found at the group level in all sites, and that the amplitude of the inter-site effects was small to moderate, with a Cohen's effect size below 0.5 on average across brain connections. We then implemented a series of Monte-Carlo simulations, based on real data, to evaluate the impact of the multisite effects on detection power in statistical tests comparing two groups (with and without the effect) using a general linear model, as well as on the prediction of group labels with a support-vector machine. As a reference, we also implemented the same simulations with fMRI data collected at a single site using an identical sample size. Simulations revealed that using data from heterogeneous sites only slightly decreased our ability to detect changes compared to a monosite study with the GLM, and had a greater impact on prediction accuracy. However, the deleterious effect of multisite data pooling tended to decrease as the total sample size increased, to a point where differences between monosite and multisite simulations were small with N=120 subjects. Taken together, our results support the feasibility of multisite studies in rs-fMRI provided the sample size is large enough.
Centre de Recherche de l'Institut Universitaire de Gériatrie de Montréal, Montréal, Canada; Department of Computer Science and Operations Research, University of Montreal, Montreal, Canada.
Christian
C
Dansereau
Centre de Recherche de l'Institut Universitaire de Gériatrie de Montréal, Montréal, Canada; Département d'anthropologie, Université de Montréal, Montréal, Canada.
Yassine
Y
Benhajali
Clinical Imaging, pRED, F.Hoffman-La Roche, Basel, Switzerland.
Celine
C
Risterucci
Clinical Imaging, pRED, F.Hoffman-La Roche, Basel, Switzerland.
Emilio Merlo
EM
Pich
Centre de Recherche de l'Institut Universitaire de Gériatrie de Montréal, Montréal, Canada.
Pierre
P
Orban
NeuroRx inc., Montréal, Canada.
Douglas
D
Arnold
Centre de Recherche de l'Institut Universitaire de Gériatrie de Montréal, Montréal, Canada; Department of Computer Science and Operations Research, University of Montreal, Montreal, Canada. Electronic address: pierre.bellec@criugm.qc.ca.
Pierre
P
Bellec
D000293:Adolescent; D000328:Adult; D001921:Brain / Q000502:physiology*; D001931:Brain Mapping / Q000379:methods*; D005260:Female; D006801:Humans; D007091:Image Processing, Computer-Assisted / Q000379:methods*; D008279:Magnetic Resonance Imaging / Q000379:methods*; D008297:Male; D008875:Middle Aged; D008959:Models, Neurological; D009010:Monte Carlo Method; D015337:Multicenter Studies as Topic; D009434:Neural Pathways / Q000502:physiology*; D012146:Rest; D060388:Support Vector Machine; D055815:Young Adult
FMRI connectivity; Monte-Carlo simulation; Multisite; Prediction accuracy; Resting-state; SVM; Sample size; Statistical power