Protein Bioinformatics Databases and Resources.
Many publicly available data repositories and resources have been developed to support protein-related information management, data-driven hypothesis generation, and biological knowledge discovery. To help researchers quickly find the appropriate protein-related informatics resources, we present a comprehensive review (with categorization and description) of major protein bioinformatics databases in this chapter. We also discuss the challenges and opportunities for developing next-generation protein bioinformatics databases and resources to support data integration and data analytics in the Big Data era.
Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA. chenc@udel.edu.
Chuming
C
Chen
Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, 19711, USA.
Hongzhan
H
Huang
Center for Bioinformatics and Computational Biology, Department of Computer and Information Sciences, University of Delaware, Newark, DE, 19711, USA.|Protein Information Resource, Department of Biochemistry and Molecular and Cellular Biology, Georgetown University Medical Center, Washington, DC, 20007, USA.
Cathy H
CH
Wu
D000818:Animals; D019295:Computational Biology / Q000379:methods*; D030541:Databases, Genetic; D023281:Genomics / Q000379:methods; D006801:Humans; D011506:Proteins / Q000235:genetics* / Q000378:metabolism*; D040901:Proteomics / Q000379:methods*; D012984:Software; D064878:Web Browser
D011506:Proteins
Big data; Bioinformatics; Data analytics; Data integration; Database; PTM; Pathway; Protein family; Protein function; Protein interaction; Protein mutation; Protein sequence; Protein structure; Proteomics