title: How do ADARs bind RNA? New protein-RNA structures illuminate substrate recognition by the RNA editing ADARs.
abstract: Deamination of adenosine in RNA to form inosine has wide ranging consequences on RNA function including amino acid substitution to give proteins not encoded in the genome. What determines which adenosines in an mRNA are subject to this modification reaction? The answer lies in an understanding of the mechanism and substrate recognition properties of adenosine deaminases that act on RNA (ADARs). Our recent publication of X-ray crystal structures of the human ADAR2 deaminase domain bound to RNA editing substrates shed considerable light on how the catalytic domains of these enzymes bind RNA and promote adenosine deamination. Here we review in detail the deaminase domain-RNA contact surfaces and present models of how full length ADARs, bearing double stranded RNA-binding domains (dsRBDs) and deaminase domains, could process naturally occurring substrate RNAs.
authors.affiliation: Department of Chemistry, University of California, Davis, CA, USA.
authors.forename: Justin M
authors.initials: JM
authors.lastname: Thomas
authors.affiliation: Department of Chemistry, University of California, Davis, CA, USA.
authors.forename: Peter A
authors.initials: PA
authors.lastname: Beal
mesh_terms: D000243:Adenosine Deaminase / Q000378:metabolism*; D020134:Catalytic Domain; D006801:Humans; D008958:Models, Molecular; D011487:Protein Conformation; D012313:RNA / Q000378:metabolism*; D017393:RNA Editing; D016601:RNA-Binding Proteins / Q000378:metabolism*; D013379:Substrate Specificity
chemical_list: D016601:RNA-Binding Proteins; D012313:RNA; C000595356:ADAR protein, human; C567955:ADARB1 protein, human; D000243:Adenosine Deaminase
keywords: ADAR; RNA editing; epitranscriptome; recoding