title: The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi.
abstract: Here we report the genome sequence of the ascomycete saprobic fungus Penicillium subrubescens FBCC1632/CBS132785 isolated from a Jerusalem artichoke field in Finland. The 39.75Mb genome containing 14,188 gene models is highly similar for that reported for other Penicillium species, but contains a significantly higher number of putative carbohydrate active enzyme (CAZyme) encoding genes.
authors.affiliation: Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.
authors.forename: Mao
authors.initials: M
authors.lastname: Peng
authors.affiliation: Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.
authors.forename: Adiphol
authors.initials: A
authors.lastname: Dilokpimol
authors.affiliation: Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; Division of Microbiology and Biotechnology, Department of Food and Environmental Sciences, University of Helsinki, Viikinkaari 9, Helsinki, Finland.
authors.forename: Miia R
authors.initials: MR
authors.lastname: Mäkelä
authors.affiliation: Division of Microbiology and Biotechnology, Department of Food and Environmental Sciences, University of Helsinki, Viikinkaari 9, Helsinki, Finland.
authors.forename: Kristiina
authors.initials: K
authors.lastname: Hildén
authors.affiliation: GenomeScan B.V., Plesmanlaan 1/D, 2333 BZ Leiden, The Netherlands.
authors.forename: Sander
authors.initials: S
authors.lastname: Bervoets
authors.affiliation: US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, United States.
authors.forename: Robert
authors.initials: R
authors.lastname: Riley
authors.affiliation: US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, United States.
authors.forename: Igor V
authors.initials: IV
authors.lastname: Grigoriev
authors.affiliation: CNRS UMR 7257, Aix-Marseille University, 13288 Marseille, France; INRA, USC 1408 AFMB, Marseille, France.
authors.forename: Matthieu
authors.initials: M
authors.lastname: Hainaut
authors.affiliation: CNRS UMR 7257, Aix-Marseille University, 13288 Marseille, France; INRA, USC 1408 AFMB, Marseille, France; Department of Biological Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.
authors.forename: Bernard
authors.initials: B
authors.lastname: Henrissat
authors.affiliation: Fungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; Division of Microbiology and Biotechnology, Department of Food and Environmental Sciences, University of Helsinki, Viikinkaari 9, Helsinki, Finland. Electronic address: r.devries@westerdijkinstitute.nl.
authors.forename: Ronald P
authors.initials: RP
authors.lastname: de Vries
authors.affiliation: GenomeScan B.V., Plesmanlaan 1/D, 2333 BZ Leiden, The Netherlands.
authors.forename: Zoraide
authors.initials: Z
authors.lastname: Granchi
mesh_terms: D001483:Base Sequence; D018533:Biomass; D050260:Carbohydrate Metabolism; D002874:Chromosome Mapping; D005656:Fungal Proteins / Q000235:genetics; D016681:Genome, Fungal; D006368:Helianthus / Q000382:microbiology*; D010407:Penicillium / Q000201:enzymology / Q000235:genetics* / Q000302:isolation & purification; D017422:Sequence Analysis, DNA / Q000379:methods*
chemical_list: D005656:Fungal Proteins