title: Association of heat stress protein 90 and 70 gene polymorphism with adaptability traits in Indian sheep (Ovis aries).
abstract: Heat stress proteins assist cellular proteins in the acquisition of native structure. The present research was conducted to study how thermo-tolerance is modulated by HSP90 and HSP70 gene polymorphism and its association with hemato-physio-biochemical parameters, supported by their expression profiles in Chokla, Magra, Marwari, and Madras Red sheep breeds. Least square analysis revealed significant effect (P < 0.05) of season and breed on all the physiological parameters, i.e., temperature, respiratory rate, and pulse rate (a.m. and p.m.), as well as hematological parameters like Hb, packed cell volume, total erythrocyte count (TEC), neutrophil/lymphocyte (N/L) ratio, and total leukocyte count (TLC). There was a significant influence (P < 0.05) of breed on biochemical parameters such as glucose, SGOT, phosphorous, triglyceride, and cholesterol. Eight fragments were amplified and sequenced in HSP90, and 70 genes and 13 single-nucleotide polymorphisms (SNPs) were identified. Tetra-primer amplification refractory mutation system PCR, PCR-RFLP, and allele-specific PCR genotyping protocols were developed for large-scale genotyping of five SNPs. A significant difference (P < 0.05) of rectal temperature (a.m.), respiratory rate (p.m.), triglyceride, and total protein was observed at SNP01; albumin at SNP2; pulse rate (p.m.) at SNP3; and rectal temperature (p.m.), pulse rate (p.m.), Hb (g/dL), and N/L ratio at SNP4 and TLC at SNP5. Gene expression analysis revealed higher expression in less adapted animals with Madras Red < Magra < Chokla < Marwari expression pattern [corrected]. Predominant allele was found to be superior in most of the SNPs (SNP1-4) indicating the selection acting in directional manner (positive selection). Finally, it is concluded that TACCA haplotype combination of SNP1-SNP2-SNP3-SNP4-SNP5 might be of some selection advantage for the identification of animals more adaptable to heat stress.
authors.affiliation: ICAR-NDRI, Karnal, Haryana, 132001, India.
authors.forename: K M
authors.initials: KM
authors.lastname: Singh
authors.affiliation: ICAR-National Bureau of Animal Genetics Resources, GT Road Bypass, Karnal, Haryana, 132001, India. sssanjeev197@gmail.com.
authors.forename: S
authors.initials: S
authors.lastname: Singh
authors.affiliation: ICAR-National Bureau of Animal Genetics Resources, GT Road Bypass, Karnal, Haryana, 132001, India.
authors.forename: I
authors.initials: I
authors.lastname: Ganguly
authors.affiliation: ICAR-National Bureau of Animal Genetics Resources, GT Road Bypass, Karnal, Haryana, 132001, India.
authors.forename: Raja K
authors.initials: RK
authors.lastname: Nachiappan
authors.affiliation: LUVAS, Regional Station, Uchani, Karnal, India.
authors.forename: A
authors.initials: A
authors.lastname: Ganguly
authors.affiliation: PGRIAS, TANUVAS, Kattupakkam, 600056, India.
authors.forename: R
authors.initials: R
authors.lastname: Venkataramanan
authors.affiliation: ARC, CSWRI, Bikaner, Rajasthan, 334001, India.
authors.forename: A
authors.initials: A
authors.lastname: Chopra
authors.affiliation: ARC, CSWRI, Bikaner, Rajasthan, 334001, India.
authors.forename: H K
authors.initials: HK
authors.lastname: Narula
mesh_terms: D000483:Alleles; D000818:Animals; D005787:Gene Frequency; D056726:Genetic Association Studies; D005838:Genotype; D018840:HSP70 Heat-Shock Proteins / Q000235:genetics* / Q000378:metabolism; D018841:HSP90 Heat-Shock Proteins / Q000235:genetics* / Q000378:metabolism; D006239:Haplotypes; D006339:Heart Rate / Q000502:physiology; D007194:India; D016018:Least-Squares Analysis; D020641:Polymorphism, Single Nucleotide; D012007:Rectum / Q000502:physiology; D056152:Respiratory Rate / Q000502:physiology; D012756:Sheep; D059467:Transcriptome; D014280:Triglycerides / Q000097:blood
chemical_list: D018840:HSP70 Heat-Shock Proteins; D018841:HSP90 Heat-Shock Proteins; D014280:Triglycerides
keywords: Association study; HSP gene expression; HSP70; HSP90; Heat stress proteins; Molecular chaperones; Polymorphism