title: NMR-based Stable Isotope Resolved Metabolomics in systems biochemistry.
abstract: Metabolism is the basic activity of live cells, and monitoring the metabolic state provides a dynamic picture of the cells or tissues, and how they respond to external changes, for in disease or treatment with drugs. NMR is an extremely versatile analytical tool that can be applied to a wide range of biochemical problems. Despite its modest sensitivity its versatility make it an ideal tool for analyzing biochemical dynamics both in vitro and in vivo, especially when coupled with its isotope editing capabilities, from which isotope distributions can be readily determined. These are critical for any analyses of flux in live organisms. This review focuses on the utility of NMR spectroscopy in metabolomics, with an emphasis on NMR applications in stable isotope-enriched tracer research for elucidating biochemical pathways and networks with examples from nucleotide biochemistry. The knowledge gained from this area of research provides a ready link to genomic, epigenomic, transcriptomic, and proteomic information to achieve systems biochemical understanding of living cells and organisms.
authors.affiliation: Center for Environmental Systems Biochemistry, University of Kentucky, USA; Department of Toxicology and Cancer Biology, University of Kentucky, USA. Electronic address: Andrew.lane@uky.edu.
authors.forename: Andrew N
authors.initials: AN
authors.lastname: Lane
authors.affiliation: Center for Environmental Systems Biochemistry, University of Kentucky, USA; Department of Toxicology and Cancer Biology, University of Kentucky, USA.
authors.forename: Teresa W-M
authors.initials: TW
authors.lastname: Fan
mesh_terms: D000818:Animals; D006801:Humans; D007554:Isotopes / Q000737:chemistry; D053858:Metabolic Networks and Pathways; D055432:Metabolomics / Q000379:methods*; D019906:Nuclear Magnetic Resonance, Biomolecular / Q000379:methods*
chemical_list: D007554:Isotopes
keywords: Isotope editing; Isotopomer distribution analysis; Stable Isotope Resolved Metabolomics (SIRM)