title: Fluorescence background removal method for biological Raman spectroscopy based on empirical mode decomposition.
abstract: Raman spectroscopy of biological tissue presents fluorescence background, an undesirable effect that generates false Raman intensities. This paper proposes the application of the Empirical Mode Decomposition (EMD) method to baseline correction. EMD is a suitable approach since it is an adaptive signal processing method for nonlinear and non-stationary signal analysis that does not require parameters selection such as polynomial methods. EMD performance was assessed through synthetic Raman spectra with different signal to noise ratio (SNR). The correlation coefficient between synthetic Raman spectra and the recovered one after EMD denoising was higher than 0.92. Additionally, twenty Raman spectra from skin were used to evaluate EMD performance and the results were compared with Vancouver Raman algorithm (VRA). The comparison resulted in a mean square error (MSE) of 0.001554. High correlation coefficient using synthetic spectra and low MSE in the comparison between EMD and VRA suggest that EMD could be an effective method to remove fluorescence background in biological Raman spectra.
authors.forename: Maritza
authors.initials: M
authors.lastname: Leon-Bejarano
authors.forename: Guadalupe
authors.initials: G
authors.lastname: Dorantes-Mendez
authors.forename: Miguel
authors.initials: M
authors.lastname: Ramirez-Elias
authors.forename: Martin O
authors.initials: MO
authors.lastname: Mendez
authors.forename: Alfonso
authors.initials: A
authors.lastname: Alba
authors.forename: Ildefonso
authors.initials: I
authors.lastname: Rodriguez-Leyva
authors.forename: M
authors.initials: M
authors.lastname: Jimenez
mesh_terms: D000465:Algorithms; D005453:Fluorescence; D006801:Humans; D012815:Signal Processing, Computer-Assisted; D059629:Signal-To-Noise Ratio; D012867:Skin / Q000737:chemistry; D013059:Spectrum Analysis, Raman / Q000379:methods*