title: High Resolution Microultrasound (μUS) Investigation of the Gastrointestinal (GI) Tract.
abstract: High resolution, microultrasound (μUS) scanning of the gastrointestinal (GI) tract has potential as an important transmural imaging modality to aid in diagnosis. Operating at higher frequencies than conventional clinical ultrasound instruments, μUS is capable of providing scanned images of the GI tract with higher resolution. To investigate the use of μUS for this application, a phantom which is cost effective, within ethical guidelines and, most importantly, similar in histology to the human GI tract is necessary. Therefore, a phantom utilizing porcine small bowel tissue has been developed for custom assembled μUS scanning systems. Two such systems, a stepping scanner and a continuous sweep scanner were utilized to repeatedly scan regions of prepared samples of porcine small bowel tissue. The porcine small bowel tissue phantom was perfused with degassed phosphate buffer saline (dPBS) solution through a cannula inserted in its mesenteric vessel to simulate in vivo conditions and achieve better μUS mucosal characterization. The μUS system scans a transducer across the tissue phantom to acquire RF echo data, which is then processed using MATLAB. A B-scan reconstruction produces 2D images with relative echo strength mapped to a color map of the user's choice. The phantom developed also allows for modifications such as the insertion of fiducial markers to detect tissue change over time and simultaneous perfusion and scanning, providing a platform for more detailed research and investigation into μUS scanning of the GI tract.
authors.affiliation: University of Dundee School of Medicine, Wilson House, 1 Wurburg Loan, Dundee Medipark, Dundee, DD21FD, Scotland, UK.
authors.forename: Thineskrishna
authors.initials: T
authors.lastname: Anbarasan
authors.affiliation: University of Dundee School of Medicine, Wilson House, 1 Wurburg Loan, Dundee Medipark, Dundee, DD21FD, Scotland, UK.
authors.forename: Christine E M
authors.initials: CE
authors.lastname: Démoré
authors.affiliation: University of Glasgow School of Engineering, Glasgow, G12 8QQ, UK.
authors.forename: Holly
authors.initials: H
authors.lastname: Lay
authors.affiliation: University of Dundee School of Medicine, Wilson House, 1 Wurburg Loan, Dundee Medipark, Dundee, DD21FD, Scotland, UK.
authors.forename: Mohammed R S
authors.initials: MR
authors.lastname: Sunoqrot
authors.affiliation: University of Dundee School of Medicine, Wilson House, 1 Wurburg Loan, Dundee Medipark, Dundee, DD21FD, Scotland, UK.
authors.forename: Romans
authors.initials: R
authors.lastname: Poltarjonoks
authors.affiliation: University of Glasgow School of Engineering, Glasgow, G12 8QQ, UK.
authors.forename: Sandy
authors.initials: S
authors.lastname: Cochran
authors.affiliation: University of Dundee School of Medicine, Wilson House, 1 Wurburg Loan, Dundee Medipark, Dundee, DD21FD, Scotland, UK. b.cox@dundee.ac.uk.
authors.forename: Benjamin F
authors.initials: BF
authors.lastname: Cox
mesh_terms: D000465:Algorithms; D000818:Animals; D004867:Equipment Design; D041981:Gastrointestinal Tract / Q000000981:diagnostic imaging*; D007091:Image Processing, Computer-Assisted; D007421:Intestine, Small / Q000000981:diagnostic imaging; D019047:Phantoms, Imaging; D012984:Software; D013552:Swine; D014463:Ultrasonography / Q000295:instrumentation / Q000379:methods* / Q000592:standards
keywords: Gastrointestinal tract; High resolution ultrasound; Microultrasound; Phantom development; Porcine small bowel tissue