Computational Drug Repositioning Using Continuous Self-Controlled Case Series.
Computational Drug Repositioning (CDR) is the task of discovering potential new indications for existing drugs by mining large-scale heterogeneous drug-related data sources. Leveraging the patient-level temporal ordering information between numeric physiological measurements and various drug prescriptions provided in Electronic Health Records (EHRs), we propose a Continuous Self-controlled Case Series (CSCCS) model for CDR. As an initial evaluation, we look for drugs that can control Fasting Blood Glucose (FBG) level in our experiments. Applying CSCCS to the Marshfield Clinic EHR, well-known drugs that are indicated for controlling blood glucose level are rediscovered. Furthermore, some drugs with recent literature support for the potential effect of blood glucose level control are also identified.
University of Wisconsin.
Zhaobin
Z
Kuang
Morgridge Institute.
James
J
Thomson
Marshfield Clinic.
Michael
M
Caldwell
Marshfield Clinic.
Peggy
P
Peissig
Morgridge Institute.
Ron
R
Stewart
University of Wisconsin.
David
D
Page
Computational Drug Repositioning; Longitudinal Data; Self-Controlled Case Series