Urbanization and the dynamics of RNA viruses in Mallards (Anas platyrhynchos).
Urbanization is intensifying worldwide, and affects the epidemiology of infectious diseases. However, the effect of urbanization on natural host-pathogen systems remains poorly understood. Urban ducks occupy an interesting niche in that they directly interact with both humans and wild migratory birds, and either directly or indirectly with food production birds. Here we have collected samples from Mallards (Anas platyrhynchos) residing in a pond in central Uppsala, Sweden, from January 2013 to January 2014. This artificial pond is kept ice-free during the winter months, and is a popular location where the ducks are fed, resulting in a resident population of ducks year-round. Nine hundred and seventy seven (977) fecal samples were screened for RNA viruses including: influenza A virus (IAV), avian paramyxovirus 1, avian coronavirus (CoV), and avian astrovirus (AstroV). This intra-annual dataset illustrates that these RNA viruses exhibit similar annual patterns to IAV, suggesting similar ecological factors are at play. Furthermore, in comparison to wild ducks, autumnal prevalence of IAV and CoV are lower in this urban population. We also demonstrate that AstroV might be a larger burden to urban ducks than IAV, and should be better assessed to demonstrate the degree to which wild birds contribute to the epidemiology of these viruses. The presence of economically relevant viruses in urban Mallards highlights the importance of elucidating the ecology of wildlife pathogens in urban environments, which will become increasingly important for managing disease risks to wildlife, food production animals, and humans.
Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden. Electronic address: Michelle.Wille@influenzacentre.org.
Michelle
M
Wille
Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden.
Kristine
K
Lindqvist
Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden; Department of Laboratory Medicine, Division of Clinical Microbiology, Karolinska Institute, Karolinska University Hospital, SE-14186 Huddinge, Sweden.
Shaman
S
Muradrasoli
Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden; Section for Infectious Diseases, Department of Medical Sciences, Uppsala University, Uppsala, Sweden.
Björn
B
Olsen
Zoonosis Science Center, Department of Medical Biochemistry and Microbiology, Uppsala University, Uppsala, Sweden; Section for Infectious Diseases, Department of Medical Sciences, Uppsala University, Uppsala, Sweden.
Josef D
JD
Järhult
D025041:Animal Migration / Q000502:physiology; D000818:Animals; D000835:Animals, Wild; D046090:Anseriformes; D019200:Astroviridae / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification; D019350:Astroviridae Infections / Q000453:epidemiology / Q000662:veterinary* / Q000821:virology; D002947:Cities; D018352:Coronavirus Infections / Q000453:epidemiology / Q000662:veterinary* / Q000821:virology; D005243:Feces / Q000821:virology; D000073642:Gammacoronavirus / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification; D009980:Influenza A virus / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification; D005585:Influenza in Birds / Q000453:epidemiology* / Q000821:virology; D009521:Newcastle Disease / Q000453:epidemiology* / Q000821:virology; D009522:Newcastle disease virus / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification; D010802:Phylogeny; D061005:Ponds; D012367:RNA, Viral / Q000235:genetics; D013548:Sweden / Q000453:epidemiology; D014507:Urbanization
D012367:RNA, Viral
Astrovirus; Coronavirus; Disease dynamics; Influenza A virus; Paramyxovirus; Urbanization